Gene Pden_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1251 
Symbol 
ID4580017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1214337 
End bp1215191 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID639768569 
ProductABC transporter related 
Protein accessionYP_915052 
Protein GI119383996 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGC TGCTTTCGGT TCGGAACCTC CGCGTCTCCT TCCCGACCCG CTCGGGCATG 
TTCGAGGCGG TGCGCGGTGT CAGCTTCGAC CTTGGCCGGG AACGGCTGGG CGTGGTGGGC
GAAAGCGGTT CGGGCAAGTC GATGACCGGC CGCGCCATCC TCGGCCTCGT CCGCCCGCCC
GGGCGGGTCG AGGCCGAGCG CATGGAACTG GGCGGCGAGT CGATCCTGAA CCTGCCCGAG
GCCCGCATGC GCCGCCTGCG CGGCTCGCGC ATCAGCATGG TGATGCAGGA CCCCAAGTTC
AGCCTGAACC CGGTGATGAC CGTGGGCCGG CAGATCATGG AGGGCTACCG CCTGCATACC
GGCAAGAGCC GCGCCGCCGC CCGCGACAAG GCGCTGGAGA TGCTGGCCGC GGTGCAGATC
CGCGACCCCG AGCGGGTCTT TCACGCCTAT CCGCACGAGG TCTCGGGCGG CATGGGCCAG
CGCATCATGA TCGCGATGAT GCTGGCCCCC GACCCCGAGA TCCTGATCGC GGACGAGCCC
ACATCGGCGC TGGACGTCTC GGTCAGGAAC GAGGTGCTGC GCATCATGGA CCGGCTGGTC
GGCGCCCGCG GCATGGGGCT GATCTTCATC AGCCACGACC TGAACCTGGT CGCGCAGTTC
TGCGATCGCG TCCTCATCAT GTATGCCGGC CGCGTGGTCG AGGAACTGCC CGCCCGCGAC
CTGCACGCCG CGAAGCACCC CTATACGCAG GGCCTCTTGA ACAGCCTGCC GCGCCTCGAC
CGCCCTGTCG AGCGCCTCGC GGTCCTGCAA AGGCAAGAGG GCTGGCGCGA CGCCCTGCCG
GCGGAAACCC CGTGA
 
Protein sequence
MSPLLSVRNL RVSFPTRSGM FEAVRGVSFD LGRERLGVVG ESGSGKSMTG RAILGLVRPP 
GRVEAERMEL GGESILNLPE ARMRRLRGSR ISMVMQDPKF SLNPVMTVGR QIMEGYRLHT
GKSRAAARDK ALEMLAAVQI RDPERVFHAY PHEVSGGMGQ RIMIAMMLAP DPEILIADEP
TSALDVSVRN EVLRIMDRLV GARGMGLIFI SHDLNLVAQF CDRVLIMYAG RVVEELPARD
LHAAKHPYTQ GLLNSLPRLD RPVERLAVLQ RQEGWRDALP AETP