| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1240 |
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| Symbol | |
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| ID | 4581094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1202142 |
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| End bp | 1203749 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639768558 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_915041 |
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| Protein GI | 119383985 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.770213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGTTG CGGCCGCTCT GGCGGCCATG CCGCGCGTCG CGGCGGCGCA GGCGCTGGAC
GTGGTGCCGG TCGCGGCGCT TCCTGCGCCC AGGCTAAGCT TTTCCGAGCA GGAAATGCAA
CTGGCCCAGC AGGTTGCCGA CCATCCGGGC CTGGCCGATT TCTATGGCAC GAACGGGCTG
AAGCCGGTCT TTACCGGCGC CGCGGGGGCC GCGCGCCGCG CTGCGCTGAT CGAGGCGCTG
GGGCAGGCGG CCTCGCACGG GTTGCCGCCC ACGCGTTATC GCCAGGCGGC GTTGCGCACC
CTCGACCGCG AGGGCGCCGA CACGGTCGAG GAAGAGATCC GCTTTGCCCG CGCCTTCGCC
GACTGGAGCC GCGACGTGTC GGGCGGGATC CTCGATCCGC GCCGGGTCGA ACCCGGCATC
AAGCGCGAGG TGCAGCGCCC GCGGACCGGC GATCTGCTGC GCGCCTTTGC CGCCGCCGCC
GATCCGGTCG CCATGCTCGC TGCGCTGCCG CCGCAGGATG CGCGCTATGA GGCGCTGCGC
CAGGCGCTGG CGCGGCAGTC GCAACTGGTC GCGCCCGGCG ATGCGCCGCG GGTGGCCGAG
GGGCTGTGGC GCGAGGGGAC CAGCGACCCG GCGGTCGCGG CGCTGCGCGT GCGCCTTGCC
TCGGTCGGTT TCGCCGCGGC GCCCATGGGC AGCCCGCTGA CCTATGACGG GGCGCTGGCG
CAGGCGGTCG CCGCCTATCA GAAGGCGGCG GGCCTGCCGG CGGACGGGGT GGCCGGGCCG
CGCACGGTGG CGCGGCTGAA CCGCGGCACC GGCCCCGAGG CCGAGGCGAT CCTGGTTGCG
CTGGAGCGGA TGCGCTGGAT GCGCGGGCAC GACCTGAACG CCCGCCATGT CTGGGTGAAC
CTGCCCGAGT TCAACGCCCG CATCTACGAG AACGGCCGAG AGGTCTTCGA GACCCGCGTG
GTCATCGGCA AGGCCAATCG CGAATTCGAG ACGCCCGAGT TCAGCGAGAC GATGAAATAC
ATGGTCGTCA ACCCGCGCTG GAACGTGCCG CGCTCGATCA CCGTCAAGGA ATACCTGCCG
CGGCTTCAGG CCAACCGGCA TGCGGTCGGG CATCTCGACG TGGTGGACGG GGCCGGCAAT
GTCATTGCGC GCGACCGCAT CGACTTTCGC AAATACAGCG CCAAGACCTT TCCCTATCGC
ATGCGGCAGA AACCCAGCGA CGACAATGCG TTGGGGCAGG TCAAGTTCAT GTTCCCGAAC
CCGTGGAACA TCTATCTGCA CGACACGCCG ACCAAGCATC TGTTCAACCA GTCCAGCCGC
GCCTATTCGC ATGGCTGCAT CCGCGTCGGC CGCCCGGTCG ACCTGGCGCA TGAGCTGCTG
AAGGGCCAGG TGGAAAGCCC CGAGGCGGTT TTCTCCAAGG CGCTGAAATC CGGGCGCGAG
ACCTATCTGA ACCTGCGCCC GCCCGTGCCG GTGCATCTGG TCTATTTCAC CGCCTTCCCC
GACGAGAGCG GCCAGATCCG CCGTTTTCCC GACATCTATG GCCGCGATGC GCTGGTGCAC
GCGGCGCTGG TCAAGGCCGG GCTGGATTCC GCGGCCGCGG ATGAATAG
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| Protein sequence | MVVAAALAAM PRVAAAQALD VVPVAALPAP RLSFSEQEMQ LAQQVADHPG LADFYGTNGL
KPVFTGAAGA ARRAALIEAL GQAASHGLPP TRYRQAALRT LDREGADTVE EEIRFARAFA
DWSRDVSGGI LDPRRVEPGI KREVQRPRTG DLLRAFAAAA DPVAMLAALP PQDARYEALR
QALARQSQLV APGDAPRVAE GLWREGTSDP AVAALRVRLA SVGFAAAPMG SPLTYDGALA
QAVAAYQKAA GLPADGVAGP RTVARLNRGT GPEAEAILVA LERMRWMRGH DLNARHVWVN
LPEFNARIYE NGREVFETRV VIGKANREFE TPEFSETMKY MVVNPRWNVP RSITVKEYLP
RLQANRHAVG HLDVVDGAGN VIARDRIDFR KYSAKTFPYR MRQKPSDDNA LGQVKFMFPN
PWNIYLHDTP TKHLFNQSSR AYSHGCIRVG RPVDLAHELL KGQVESPEAV FSKALKSGRE
TYLNLRPPVP VHLVYFTAFP DESGQIRRFP DIYGRDALVH AALVKAGLDS AAADE
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