Gene Pden_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1238 
Symbol 
ID4581092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1201248 
End bp1201808 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content64% 
IMG OID639768556 
Producthypothetical protein 
Protein accessionYP_915039 
Protein GI119383983 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0154317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.697669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTG AATCACTCTC GCGTCGGGGC ATCCTTGGCG TCTTCGCGGC GACCACGGTG 
GCCGCAGCGC CGGTTATGGC CAATGCCTTC GGACTTCTGC GGGGCGCCGG CGACATCCGC
CGCATTCGCA TGTATTCGGG GCGCACGGGC GAAAGCATCG ACACGGTCTA TTGGGTCGAA
GGCAAGTATA TCCGGGATGC CCTCAATGAA ATCAACATCT TCATGCGCGA CTGGCGGACG
GGCCAAGCGA TCGGGTTCGA TCCGCGCGCG ATCGACATTG CCGCAGCCTC GCACCGGCTG
CTGCAGACCA ACGAACCCTA CATGATGCTG TCGGGCTATC GCTCGCCGCA GACCAACGCC
ATGCTGCGCT CGCGCTCTTC GGGCGTGGCC AGGAACTCGC TCCACATGGT GGGCAAGGCT
GCCGACCTGC GCCTGAAATC GCGCTCGGTC TCGCAGATGT ACAAGGCCGC GGCGGCCTGC
AACGCAGGCG GCGTCGGCAA ATATTCGCGC TCGAACTTCG TCCATATGGA CTGTGGCCCG
ATCCGCCATT GGGGCGCCTG A
 
Protein sequence
MTFESLSRRG ILGVFAATTV AAAPVMANAF GLLRGAGDIR RIRMYSGRTG ESIDTVYWVE 
GKYIRDALNE INIFMRDWRT GQAIGFDPRA IDIAAASHRL LQTNEPYMML SGYRSPQTNA
MLRSRSSGVA RNSLHMVGKA ADLRLKSRSV SQMYKAAAAC NAGGVGKYSR SNFVHMDCGP
IRHWGA