Gene Pden_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1210 
Symbol 
ID4578592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1182394 
End bp1182954 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content72% 
IMG OID639768527 
ProductHupE/UreJ protein 
Protein accessionYP_915011 
Protein GI119383955 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGT TTTCCCTCAT CACCGCCGCG ACGCTTCTGC CGCAGATGGC CCTTGCCCAT 
CCCGGCCATG ACGCGGGTCA GTTCGTCGGC GGCCTGTCGC ATCCGCTGGG CGGCGCCGAT
CACCTGCTGG CCATGGTCGC ACTTGGCCTG CTGGCCGCAC AGATCGGCGG GCGCGCGCTC
TGGGCGCTGC CCATGGCCTT TGTCGGCGGC ATGGTCTCCG GAGGCGTCGC GGGCTGGGCT
GGGCTGCCCT TTCCGGGGGT CGAGCCGATG ATCCTCGCCT CGGTGGTGAT CCTTGGGGCA
CTGGTGGCCA TGGCGGCACG GCTGCCGCTG GCGGTGCTGG CGCCGGGCAG CGCCTTCTTC
GGCTTTGCGC ATGGCTGGGC GCATGGGGCC GAGGGACCGG CGCAGGGCCT GATCGCCTAT
GCTGTCGGCT TCGCCATCGC GACCGCAGCG CTGCATCTGG CTGGGATCGG CCTTGGCAGG
ATACTGCATC GCGGGGTGCT GCTGCGCGGG CTGGGCAGCG GCACGGCGCT GGCGGGCATC
GCCCTGGCGA TGGGGGGCTG A
 
Protein sequence
MKRFSLITAA TLLPQMALAH PGHDAGQFVG GLSHPLGGAD HLLAMVALGL LAAQIGGRAL 
WALPMAFVGG MVSGGVAGWA GLPFPGVEPM ILASVVILGA LVAMAARLPL AVLAPGSAFF
GFAHGWAHGA EGPAQGLIAY AVGFAIATAA LHLAGIGLGR ILHRGVLLRG LGSGTALAGI
ALAMGG