Gene Pden_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1198 
Symbol 
ID4580081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1172410 
End bp1172922 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID639768514 
ProductMarR family transcriptional regulator 
Protein accessionYP_914999 
Protein GI119383943 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.266179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAA CCTGGTCGAG AAGCTTTCGG CAGGGCAATG CGATCTACAA GCTGAACCTG 
CTGGCGACCG AATCGATCCG CTCGGTCGAA GAGCGTTTCA TCGCCCTGGT CGGGCTGGAC
GTGCGCACGA TCCGGGTGCT GCGGCTGATC GGCGACAACC CCGGCACGAC CTTTGCCGAA
CTGACGGTGA TGACCGGGCT GGAGCGCAGC CTGGTGTCGC GGCTGATCCA GAACCTGGTG
CGCGGCGGCC ATGTCGAGCG GCGCAACGAC GATGCCGATG CCCGGCGCTT CGGCCTGTTC
GTGACCGAGG CCGGGCAGCG GGTGCGCGAC CGCGCCGACC TGCTGTCCGC CCGTGCCCTC
GAGGCGGTGT TCGATCCGCT TTCCAAGGCC GAGGTGGCGG CCTTCATCGC CACCATGGAC
AGGCTGGCCG ACTGGCTGGA CAGCGAGGAT TACGCGCAAA GGATCGCCCG GATCTTCGAC
GGGATCGATT TCGACGACCC CGGCCAGCGC TAG
 
Protein sequence
MGKTWSRSFR QGNAIYKLNL LATESIRSVE ERFIALVGLD VRTIRVLRLI GDNPGTTFAE 
LTVMTGLERS LVSRLIQNLV RGGHVERRND DADARRFGLF VTEAGQRVRD RADLLSARAL
EAVFDPLSKA EVAAFIATMD RLADWLDSED YAQRIARIFD GIDFDDPGQR