| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1188 |
|---|
| Symbol | |
|---|
| ID | 4580071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1159855 |
|---|
| End bp | 1160922 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639768504 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_914989 |
|---|
| Protein GI | 119383933 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC CGACGAAACC GACGCTGGCC TTCTGGACCG ACGCCGAAGA GCTGGAATGC
GTATCGTTCC TGCGCGAGGC GCCGGATGTG ATGACCTTCT GCTTTCGCAG CCCATCCGGC
GCGCTGTTCA GCTTCGAGCC GGGGCAGTTC CTGACCCTGG AACTGCCGCT GCCCGGCGGG
GCGCTGCACC GCACCTATAC GATCTCGTCC TCGCCCTCGC GGCCGACCTC GCTGACGGTG
ACGGTCAAGG CGCAGAAGGC ATCCATCGGC ACGCGCTGGA TGTTCGACCA CCTGCGGCCC
GGGATGCGGA TCCGCGCCCG CGGCCCCGCC GGCAAGTTCT CGATGATGCA GGATCCGGCC
GAGAAATACC TGTTCATCTC GGCCGGCTCG GGCATCACGC CGATGGTGTC GATGACCACC
TTCCTTTACG ATTCCGGGCG CGATCCCGAC ATTGTCTTCG TCAACTGCGC CCGCCGCCCC
TCCGAGATCA TCTTCCGCGA GCGGCTGGAG CATATGGCGA CGCGCGTCGC CGGAATCGAC
CTGAAATGGA TCGTCGAGGA ACCCGACCCC TATCGGCCCT GGACCGGCTA TCGCGGCATG
TTCAACCAGT TGATGCTGGG CCTGATCGCG CCAGACTACC TGGAACGCGA CGTCTATTGC
TGCGGCCCCG AGCCCTTCAT GCAGGCGGTG CGCGACATCC TGCACGGGCT GGGCTACGAC
ATGGCCCGCT ATCACCAGGA AAGCTTCGGC GGCCCGCCGG CCGAGGCCGA AACGGTGCCC
GAGGACGTGG TGCCGCAAGA GGACGCGCTG GCCGAGGTCA GCTTCGCCGC CTCGGGCAAG
ACCGCCCGCT GCGCCGAGAC CGAGACCATC CTGGCCACGG CGCGGGCGGC GGGCATCCCG
ATCCCCTCGG GCTGCGGCAT GGGCATCTGC GGCACCTGCC AGGTGCTCAA GCTCTCGGGC
CAGGTCCACA TGGTCCACAA TGGCGGCATC ACCGACGAGG ATGTCGAGGC GGGCTATATC
CTGGCCTGCT GCTCGCGGCC CATCGGCGAC GTCACCATCG ACCTGTGA
|
|---|
| Protein sequence | MNAPTKPTLA FWTDAEELEC VSFLREAPDV MTFCFRSPSG ALFSFEPGQF LTLELPLPGG
ALHRTYTISS SPSRPTSLTV TVKAQKASIG TRWMFDHLRP GMRIRARGPA GKFSMMQDPA
EKYLFISAGS GITPMVSMTT FLYDSGRDPD IVFVNCARRP SEIIFRERLE HMATRVAGID
LKWIVEEPDP YRPWTGYRGM FNQLMLGLIA PDYLERDVYC CGPEPFMQAV RDILHGLGYD
MARYHQESFG GPPAEAETVP EDVVPQEDAL AEVSFAASGK TARCAETETI LATARAAGIP
IPSGCGMGIC GTCQVLKLSG QVHMVHNGGI TDEDVEAGYI LACCSRPIGD VTIDL
|
|---|
| |