| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1180 |
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| Symbol | benD |
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| ID | 4579945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1151343 |
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| End bp | 1152128 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639768496 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_914981 |
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| Protein GI | 119383925 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.441617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGG CCGTTTTCGC CGGGCGTTTC TCCGGCAAGG TGCTGGTGGT GACGGGGGCG
GCACAGGGCA TCGGCCGCGC CGTCGCCCTG CGCGCGGCCG CCGAGGGCGG CAGGGTTCTG
TTCGTGGACC GGGCCGATTT CGTGGCCGAT GTGGCGGCCG AGGCCGGGGG CGAGGCTGCG
GCCTTCCATG CCGATCTGGA AACCTGGGAG GGCGCCGAGG CTGCGATGCA CCATGCCGCC
CGGACCTTCG GCGGTATCGA CATCCTGGTC AACAATGTCG GCGGCGCAAT CCGCATGCGG
CCCTTTGCCG AATTCGAGCC CGCCCAGATC GACGCCGAGA TCCGGCGATC GCTGATGCCG
ACGCTGTATT GCTGCCGCGC CGTCCTGCCG CATCTGACGG CGCGCGGCGG CGGCACCATC
GTCAACGTTT CCTCGAACGC CACGCGCGGC ATCCACCGGG TTCCCTATTC GGCGGCCAAG
GGTGGCATCA ATGCCGTCAC CCAGTCGCTG GCGATGGAGC TGGCCCCCCG CAACATCCGC
GTGGTCGCAA CCGCCCCCGG CGGCACCGAG GCACCGCCCC GTCGCATTCC GCGCAATGCC
GAGGGCGACA GCCCCGCCGA ACGGCAATGG ATGGCCGAGG TCGTGGACCA GGTGAAGCAG
TCCGCCTTCA TGAAGCGCTA CGGCAGCATC GAGGAACAGG CCGCGCCGAT CCTGTTCCTG
GCGTCCGACG AGGCATCCTA CATCACCGGC AGCATTCTGC CCGTCGCGGG AGGCGACATC
GGCTGA
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| Protein sequence | MTGAVFAGRF SGKVLVVTGA AQGIGRAVAL RAAAEGGRVL FVDRADFVAD VAAEAGGEAA
AFHADLETWE GAEAAMHHAA RTFGGIDILV NNVGGAIRMR PFAEFEPAQI DAEIRRSLMP
TLYCCRAVLP HLTARGGGTI VNVSSNATRG IHRVPYSAAK GGINAVTQSL AMELAPRNIR
VVATAPGGTE APPRRIPRNA EGDSPAERQW MAEVVDQVKQ SAFMKRYGSI EEQAAPILFL
ASDEASYITG SILPVAGGDI G
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