| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1176 |
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| Symbol | |
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| ID | 4579941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1147377 |
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| End bp | 1148315 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768492 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_914977 |
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| Protein GI | 119383921 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.598074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA AGATTTTCGA CCGACCCGAC ACCCAGGCGT TTCTGAAGGA ACTCAGCGGG
CTGAACAACG ACAGCGGCAA TCCGCGCATG AAGCAGATCG TGCATCGGCT GATGTCCGAC
CTGTTCAAGG CCATCGACGA TCTGGACATC ACCCCCGACG AATACTGGAT GGGCGTGGCC
TGGCTGAACG ATCTGGGCGC GGCCGGGCAG GCCGGGCTGA TCTCGCCGGG CCTGGGGGTC
GATCACTTCA TCGACGAACG GCTGGATGCC ATCGACGCCT CGCTGGGGAT CGAGAACCCC
ACGCCGCGCA CCATCGAGGG GCCGCTCTAT GTGGCCGGCG CCCCGGAATC CGTCGGCTTC
GCGCGGCTGG ATGACGGCAC CGACACCGAC GGCCATACGC TGGTCATGCA CGGCACGGTT
TACGGATCGG ACGGCAAGCC GCTGCCCGGC GCCAAGGTCG AGGTGTGGCA CTGCGACACC
CGCGGCTTCT ATTCGCATTT CGATCCGACC GGCAAGCAGG CGCCCTTCAA CATGCGCCGC
ACGATCATCG CCGACGAGGA CGGGCGCTAC AGGTTCCAGA GCATCCTGCC CAGCGGCTAT
GGCGTGCCCC CCGGCAGCCC GACCGAAAAG CTGTTGACGG CGCTTGGCCG CCACGGCCAG
CGTCCGGCGC ATATCCATTT CTTCGTCAGC GCCGACGGTC ACCGCAAGCT GACCACGCAG
ATCAACATCG AAGGCGATCC GCTGATCAAC GACGACTTCG CCTATGCCAC CCGCGAAGGG
CTGGTGCCCT CGGTCGTCGA ACGCACGGAC GAGGAAAGCA TCCACGCCAA CAACCTCAAC
GGCCCCTTTG CCGAGATCGC CTTCGACATC CACCTGACCG CCCTGGTCGA CGGCGTCGAC
AACCAGGTCA ACGAACAGCG CCGCCGCGCC GCAGCCTGA
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| Protein sequence | MTVKIFDRPD TQAFLKELSG LNNDSGNPRM KQIVHRLMSD LFKAIDDLDI TPDEYWMGVA
WLNDLGAAGQ AGLISPGLGV DHFIDERLDA IDASLGIENP TPRTIEGPLY VAGAPESVGF
ARLDDGTDTD GHTLVMHGTV YGSDGKPLPG AKVEVWHCDT RGFYSHFDPT GKQAPFNMRR
TIIADEDGRY RFQSILPSGY GVPPGSPTEK LLTALGRHGQ RPAHIHFFVS ADGHRKLTTQ
INIEGDPLIN DDFAYATREG LVPSVVERTD EESIHANNLN GPFAEIAFDI HLTALVDGVD
NQVNEQRRRA AA
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