| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1174 |
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| Symbol | |
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| ID | 4579939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1145826 |
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| End bp | 1147016 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639768490 |
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| Product | muconate and chloromuconate cycloisomerases |
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| Protein accession | YP_914975 |
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| Protein GI | 119383919 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.676912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT CATTCGCCCC CCTCGCCCCA ACCTCGGATA TCCGCCCGGT CGTTTCGCGT
GTGGAAACGG TGATCGTCGA TCTGCCGACG ATCCGGCCGC ACAAGCTTTC GGTCGCGACA
ATGAACGGGC AGGTGCTGAT GCTTGTCCGC GTGCATTGCA GCGACGGGAT CGTCGGCATC
GGCGAGGGAA CCACGATCGG CGGCCTGGCC TATGGCGGCG AAAGCCCCGA AAGCATGAAG
ACCAACATCG ACACCTGGTT CGCGCCGGTG ATGGTCGGCC AGGATGCGAC GCAGGTGCAG
GCGCTCATGG CGCGGATCGG CGGGATGGTG CGCGAGAACC GCTTTGCCAA ATCGGCCGTG
GAAACGGCGC TGCTGGATGC GCAGGGCAAG CGGGTCGGCC TGCCGGTCAG CGAGCTTCTG
GGCGGGCGGC GGCGCGACCG GCTGCCGGTG GCTTGGACGC TGGCCTCGGG CGACACGGCG
CGCGACATCG CCGAGGCGGA GCGGATGCTG GATCTGCGCC GCCACCGCGT CTTCAAGCTG
AAGATCGGCG CCCGCGGGGT CCGTGACGAC ATCGCCCATG TGGCCGCGAT CAAGGCCGCG
CTTGGCGACC GCGCCGCGGT GCGCGTGGAC GTGAACATGG CCTGGTCCGA AGGCGAGGCC
GCCTTCGGCA TGGCCGCCCT TGCAGATGCG GGCTGCGAAC TGGTCGAGCA GCCCGTGGCC
TCGACCGCGG CCCTGACGCG GCTGGTGCGC CGCTTTCCCG TGGCGCTGAT GGCCGACGAA
TCCCTGACCG GGCCGGAAAG CGCCTTCGAG ATCGCCCGCG TGCAGGGCGC GGATGTCTTT
GCCGTCAAGC TGGAGCAAAG CGGCGGCGCC TTCAACGCGC TGCGCGTCGC GGCCATCGCC
GAGGCGGCCG GGATCGGGCT TTACGGCGGC ACCATGCTGG AGGGCGCGGT GGGCACCGCA
ATCTCGGCCC ACGCCTTTTC GACCTTTGCC AACCTGCAAT GGGGAACCGA ACTGTTCGGC
CCCCTGCTGC TGACCGAAGA GATCCTGGCC GAGCCGCTGG ACTACGGCGA TTTCGAACTG
ACCGTCCCCC GAGGTCCGGG CCTTGGCGTG ACGCTGGATG AGGATCGCGT CGCCTTCTTC
GCCCGCGACG GCATCCGCAA GACGATCAGC CTGCCAGGCG GAAAGGTGTG A
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| Protein sequence | MNKSFAPLAP TSDIRPVVSR VETVIVDLPT IRPHKLSVAT MNGQVLMLVR VHCSDGIVGI
GEGTTIGGLA YGGESPESMK TNIDTWFAPV MVGQDATQVQ ALMARIGGMV RENRFAKSAV
ETALLDAQGK RVGLPVSELL GGRRRDRLPV AWTLASGDTA RDIAEAERML DLRRHRVFKL
KIGARGVRDD IAHVAAIKAA LGDRAAVRVD VNMAWSEGEA AFGMAALADA GCELVEQPVA
STAALTRLVR RFPVALMADE SLTGPESAFE IARVQGADVF AVKLEQSGGA FNALRVAAIA
EAAGIGLYGG TMLEGAVGTA ISAHAFSTFA NLQWGTELFG PLLLTEEILA EPLDYGDFEL
TVPRGPGLGV TLDEDRVAFF ARDGIRKTIS LPGGKV
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