Gene Pden_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1169 
Symbol 
ID4579934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1140148 
End bp1141122 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content70% 
IMG OID639768485 
Producttransport system permease protein 
Protein accessionYP_914970 
Protein GI119383914 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGTCC TTACCACCGT CGCTTCGCTT GGTGTCGGGC GCTTCGACAT CCCGCCGGGG 
CGCGTGGTGC GGGTCCTGCT TTCGCCCTGG CTTGCGCCGG CCGAGCCGGT CAGCCCGATA
GAATGGAGCG TGGTCGTCGT GGTCCGCCTG CCGCGCGTCG CCATGGCCGT GCTGGCCGGG
GCGGGGCTGG CGCTGGCGGG GGCCTCGCTT CAGGGACTGT TCCGCAATCC GCTGGTCGGT
CCGCAGGTGG TGGGCGTCTC GTCGGGGGCG GCCTTTGGCG GGACGCTCGC GATCCTGTTC
GGCTGGCAGC ATCTGGGGCT GGTGGGCGCG GCCTTTGCCT TCGGGCTGTC GGCGCTGGTG
CTGGTCTGGC TTTTCGCCTC GGTCGTGTCG CGCAGCAATA TCCTGGTGCT GGTGCTGGCG
GGGGTCGTGG TCTCGGGCTT TTTCGGGGCG CTGGTCAGCC TGGTGCAGTT CACCGCCGAC
AGCCAGGACA AGCTGCCGGT GATCGTGTTC TGGCTGCTGG GCAGCTTTGC CACCGCCGAC
GCGGGCAGGG CGGCTCTTCT AGCGGGGCCG GTGCTGCCCT GCGCGGCTGC GCTGCTGGCG
CTACGCTGGC GGATCAACAT CCTGTCGATG GGCGACGAGG ATGCCCGCGC GCTGGGTGTG
CCGGTCGCGG GGCTTCGCTG GCTGCTACTG GTGCTGACGG CGATGATCGT CTCGGCGCAG
GTGGCGGTTT CCGGCATGAT CGGTTGGGTC GGGCTGGTGG TCCCGCACCT GGCGCGGATG
CTGGTCGGAG CCGATCATCG GGTGCTGCTG CCGGCCTCGG CGCTGCTCGG CGGATCGTTC
CTGCTGCTGG TGGACAATGC CGCGCGCAGC ATGAGCGCCT CGGAAATTCC ACTGGGCATC
CTGACCGCAC TGATCGGCAC GCCGATGTTC GCGGCCCTGC TGTGGCGGAC GCGGGAAAGG
TGGATGGATG GCTGA
 
Protein sequence
MLVLTTVASL GVGRFDIPPG RVVRVLLSPW LAPAEPVSPI EWSVVVVVRL PRVAMAVLAG 
AGLALAGASL QGLFRNPLVG PQVVGVSSGA AFGGTLAILF GWQHLGLVGA AFAFGLSALV
LVWLFASVVS RSNILVLVLA GVVVSGFFGA LVSLVQFTAD SQDKLPVIVF WLLGSFATAD
AGRAALLAGP VLPCAAALLA LRWRINILSM GDEDARALGV PVAGLRWLLL VLTAMIVSAQ
VAVSGMIGWV GLVVPHLARM LVGADHRVLL PASALLGGSF LLLVDNAARS MSASEIPLGI
LTALIGTPMF AALLWRTRER WMDG