| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1168 |
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| Symbol | |
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| ID | 4579933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1139024 |
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| End bp | 1140085 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639768484 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_914969 |
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| Protein GI | 119383913 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.61734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAC ATGATCGCCC GACGGCGCGC CTTGCACTGG GCCTGTCGCT TGCGCTGGGG
CCTGTCTCGC CCGCGCTTGC CGACCGGATC GTCACCGACC AGATCGGGCG CGAGGTGATC
GTTCCCGACA CGGTCGAGCG TGCCGTCGTC TTGCAGCACC AGACGCTGAA CATCGCCGTG
CAGCTTGATG CGCAAGGCCA GGTCGTCGGC GTGCTGGACG AGTGGACAAA GCAGCTTGGC
CCCGGTTTCG CGCGGCTGGC GCCGGGGATC GAGGATCTCG GCACGCCCGG CGGCCTGACC
AGCGTGAACA TCGAGGAATT GCTGGCGCTG GATCCCGACG TCGTCTTCGT GACCAATTAC
GCGCCGGCAG AGATGCGCGA GCAGATCGAA TCCGTCGGCC TGCCGGTGGT GGCGATCTCG
TTGCTGGAAG TCCCGCCGGA AGAGGCGGTC AAGCAAAGCC CCGTGGTCGG CGGCGATGAG
GCCGCGGCCT ATGACGCCGG ATTCCGCCAG GGCGTGCGGC TGATCGCCGA GGTCTTCGGC
AAGGTCGAGG CCGGCGAGGA GCTGATCGCG GCGGCGACGG AGTCGCGGGC GCTGGTGGCC
GAACGGCTGG CCGACGTGGT CGAGGGCGAT CGCGTCCGCG CCTATATGGC GAACCCGGAC
CTGACGACCT ATGGCACCGG CAAATATACC GGGCTGATGA TGGCTTACGC GGGTGCGAAG
AACGTCGCGG CAGAGCAGAT CCAGGGCTAC AAGCAGGTCA CGATGGAAGA GATCCTGGGC
TGGAACCCGC AGGTCATCTT CGTGCAGGAC CGCTATCCGC AGGTGGTGGA CGAGATCAAG
GCCGGCCCCT CCTGGCAGCC CATCGACGCG GTCAAGGAAG GCCGGGTCTG GCTGATGCCG
GAATATGCCA AGGCATGGGG CTATCCGATG CCCGAGGCGA TGGCCCTGGG CGAGTTGTGG
ATGGCCAAGA CGCTTTATCC CGAGCGTTTC GAGGATATCG ACATGGATGC CCGCGCCGAC
GACTATTACC GCCGCTTCTA TCGCGTGCCC TATCGGCCGT GA
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| Protein sequence | MTRHDRPTAR LALGLSLALG PVSPALADRI VTDQIGREVI VPDTVERAVV LQHQTLNIAV
QLDAQGQVVG VLDEWTKQLG PGFARLAPGI EDLGTPGGLT SVNIEELLAL DPDVVFVTNY
APAEMREQIE SVGLPVVAIS LLEVPPEEAV KQSPVVGGDE AAAYDAGFRQ GVRLIAEVFG
KVEAGEELIA AATESRALVA ERLADVVEGD RVRAYMANPD LTTYGTGKYT GLMMAYAGAK
NVAAEQIQGY KQVTMEEILG WNPQVIFVQD RYPQVVDEIK AGPSWQPIDA VKEGRVWLMP
EYAKAWGYPM PEAMALGELW MAKTLYPERF EDIDMDARAD DYYRRFYRVP YRP
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