Gene Pden_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1137 
Symbol 
ID4578872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1111575 
End bp1112048 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID639768456 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_914941 
Protein GI119383885 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACG ACATACTCGG ACATATCCCA GCACTCCGGG CCTATTCGCG CGCCTTGTGC 
AGGTCGGTCC CGGATGCGGA CGACCTGGTC CAGGAAACCC TGCTGCGCGC CATCGAGAAC
GCGCATCGCT ACCGGCCCGG CACCAACATG CGGGCCTGGC TGTTCACCAT CATGCGCAAC
CGCTTTCTCA CCAATTGCCA GAAATCCGCG CGCGAGCGGA CCGGGGCGGC GGATTGCGCC
TCGCGGGTGC CGCAGGTCAA AGCCGGACAG GAATGGCACA TGCAGGCCAG CGAGTTGCAG
GCCGCGCTGC GCAGGATGCC GCGACATTAC CGCGAGGCGA TCGTCCTGGT CGGCGCGCTC
GGCGAGACCT ATCTGGACGC GTCGCGGATC CTCGATTGCG ACATCGGCAC CATCAAGAGC
CGGGTGAACC GCGCCCGCAC CATGTTGCGC AAGGTACTGC AGCCGGCTTT CTGA
 
Protein sequence
MSDDILGHIP ALRAYSRALC RSVPDADDLV QETLLRAIEN AHRYRPGTNM RAWLFTIMRN 
RFLTNCQKSA RERTGAADCA SRVPQVKAGQ EWHMQASELQ AALRRMPRHY REAIVLVGAL
GETYLDASRI LDCDIGTIKS RVNRARTMLR KVLQPAF