Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1137 |
Symbol | |
ID | 4578872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1111575 |
End bp | 1112048 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639768456 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_914941 |
Protein GI | 119383885 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACG ACATACTCGG ACATATCCCA GCACTCCGGG CCTATTCGCG CGCCTTGTGC AGGTCGGTCC CGGATGCGGA CGACCTGGTC CAGGAAACCC TGCTGCGCGC CATCGAGAAC GCGCATCGCT ACCGGCCCGG CACCAACATG CGGGCCTGGC TGTTCACCAT CATGCGCAAC CGCTTTCTCA CCAATTGCCA GAAATCCGCG CGCGAGCGGA CCGGGGCGGC GGATTGCGCC TCGCGGGTGC CGCAGGTCAA AGCCGGACAG GAATGGCACA TGCAGGCCAG CGAGTTGCAG GCCGCGCTGC GCAGGATGCC GCGACATTAC CGCGAGGCGA TCGTCCTGGT CGGCGCGCTC GGCGAGACCT ATCTGGACGC GTCGCGGATC CTCGATTGCG ACATCGGCAC CATCAAGAGC CGGGTGAACC GCGCCCGCAC CATGTTGCGC AAGGTACTGC AGCCGGCTTT CTGA
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Protein sequence | MSDDILGHIP ALRAYSRALC RSVPDADDLV QETLLRAIEN AHRYRPGTNM RAWLFTIMRN RFLTNCQKSA RERTGAADCA SRVPQVKAGQ EWHMQASELQ AALRRMPRHY REAIVLVGAL GETYLDASRI LDCDIGTIKS RVNRARTMLR KVLQPAF
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