| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1126 |
|---|
| Symbol | |
|---|
| ID | 4578861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1103117 |
|---|
| End bp | 1103815 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639768445 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_914930 |
|---|
| Protein GI | 119383874 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.187806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGC GCGAGATCCG CGCCTTTGCC GAGGGCGACG ACCTGCGCCG CATCGACCCC
GGCGCCACCG CCCGCACCGG CCAGCTTCAC GTCCGCAGCT TTCACGAGGA TCGCGACGAC
ACCACCCTGC TGATCGCCGA TTTCCGCCAC GCGATGCTGT GGGGCACGGG ATCGGCGCTG
CGTTCGGTCC GGGCGGCGCG CTGGCTTGCG CGGATCGGCT GGCAGGCGGT GGCGCGGGGG
GCCTCGGTCG CGTTGATGGC GGTCGGGGAC GGCGTGCCGG CGCTGCTGGG CGCCGGAACG
GGCGCGGCGC AGATGCAGGC GCTGGCGAGC CTGATGGCGC GGGCCCATGA CGCTGCGCTG
GACCTTTGCC CGCACCGGGC CGACCTTGCC CCCGCGCTGG CGCAGGCGCG GCGGATGGTG
CCGCCGGGCG GGCAGGTGCA TCTGGCGACC GGACCCGACG GGCTTGCCGG TGCCGGTGCC
GATGCCGCGC TGTCGCGACT GGCCCGCGGC CGCCGGATGC GCGTGCATCT GATCCTCGAT
CCCGCCGAGA CCGTCCCGCC CGACACGGCG CTGTCGGTCA GCAACGGCCA TGCGACGCGC
CACGGCCGGC TTTCCTCCCT GGACCCGTTG CCGCTGATCG CCCATCTGCG CGGTCTTGGG
GCGGAAGCCG AAACGGTCAT GCCCGATGAC ACGGGCTGA
|
|---|
| Protein sequence | MDLREIRAFA EGDDLRRIDP GATARTGQLH VRSFHEDRDD TTLLIADFRH AMLWGTGSAL
RSVRAARWLA RIGWQAVARG ASVALMAVGD GVPALLGAGT GAAQMQALAS LMARAHDAAL
DLCPHRADLA PALAQARRMV PPGGQVHLAT GPDGLAGAGA DAALSRLARG RRMRVHLILD
PAETVPPDTA LSVSNGHATR HGRLSSLDPL PLIAHLRGLG AEAETVMPDD TG
|
|---|
| |