| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1118 |
|---|
| Symbol | |
|---|
| ID | 4580452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1095264 |
|---|
| End bp | 1096037 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639768437 |
|---|
| Product | F420-dependent oxidoreductase, putative |
|---|
| Protein accession | YP_914922 |
|---|
| Protein GI | 119383866 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1478] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01916] F420-0:gamma-glutamyl ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCG TCACCCTGAC CGCCGTGCCC GGAGTGCCCG ACATCCAGCC CGGCGACGAT
CTGGCCGCGA TCCTCGGCGA TGCCCTGGAC CGCGCCGGCC TGTGGCCGGC CGACGGCGAT
ATTCTTTGCG TGGCGCAGAA GATCGTCTCC AAGGCCGAGG GCTGCCTGAT CGCCTATGAC
GGCGTGACGC CCTCGGATCA AGCGGTCGAG CTGGCGCGCG AACTGGGCAA GGACCCGCGC
AAGGTGCAGG TGGTGCTGGA CGAGACGCGC CGCATCGTGC GCAAGTTCCG CAGCCCCGGC
GCGCGCGAGG GCACGATCAT CTGCGAGCAT CGGTTGGGCT TTGTCTCGGC CAATGCGGCG
GTGGACGAGT CGAACATCGG GGCCGAGGGT GCCGCGCTGA TCCTGCCCCG CGACCCCGAT
GCAAGTTGCC GCGCACTGGC CCTGCGGCTG GCGCAGCGCT TTGGCGCCTC GGTCGGGGTT
GTGATGACCG ATACGTTCGG GCGGCCCTGG CGAATGGGTC AGGTCAATGT CGCCATCGGC
CTGGCGGGCG TGCCCGCCAC CATCCGCGAA CAGGGCAATA CCGATGCCTG GGGCCGTGTG
CTGCAGGTCA CCGAGCCGGC CCTGGCCGAC GAGATCGCGG CGGCCTCGGG GCTGGTGGTG
CGCAAGAACG CCCGCACGCC GCTGGTCCTG TTGCGCGGGC TGGACTGGAC ACCCGCCGCC
GACAGCCGCG CCACCGACAT CATCCGTAAA CAGCAGGAGG ACATGTTCAG ATGA
|
|---|
| Protein sequence | MNSVTLTAVP GVPDIQPGDD LAAILGDALD RAGLWPADGD ILCVAQKIVS KAEGCLIAYD
GVTPSDQAVE LARELGKDPR KVQVVLDETR RIVRKFRSPG AREGTIICEH RLGFVSANAA
VDESNIGAEG AALILPRDPD ASCRALALRL AQRFGASVGV VMTDTFGRPW RMGQVNVAIG
LAGVPATIRE QGNTDAWGRV LQVTEPALAD EIAAASGLVV RKNARTPLVL LRGLDWTPAA
DSRATDIIRK QQEDMFR
|
|---|
| |