Gene Pden_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1107 
Symbol 
ID4580441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1082878 
End bp1083873 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content70% 
IMG OID639768426 
Productalcohol dehydrogenase 
Protein accessionYP_914911 
Protein GI119383855 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA CATTCCGCGC GCTTATGATC GAGGACCGGG ACGGCAAGCC CGTGGCCGGC 
TTTCGCGACC TGACCCGCGA CGCGCTGCCC GACCATGAGG TGTTGGTCGA GGTCGCCTAT
TCGACCCTGA ACTACAAGGA CGGGCTGGCA GTCACCGGCA AGGGCCGCAT CGCCCGCCGC
CTGCCGATGG TGGCGGGGAT CGATCTTGCC GGCACGGTGG TCGAAAGCCG CTCGGACCGC
TGGCAGCCGG GCGACAAGGT GATCGTGAAC GGCTGGGGAT TGTCGGAAAC CGAATGGGGC
GGCTACAGCC GGTTCCAGCG CCTCAAGCCC GAATGGTTGA CCCGCCTGCC CGAGGGGTTT
TCGTTGCAGG ATGCCATGGC CATCGGCACG GCCGGCTATA CTGCCGCGCT TTGCGTCGAT
GCGCTGGAGG ACTGGGGCGC GATCCAGCCC GGTGGCCCCG AGGTTCTGGT GACGGGCGCC
GCCGGCGGCG TCGGCTCGAC GGCGATCAGC CTGCTGGCGG CCAAGGGCTA TACCGTCACC
GCCGCCACCG GCCGGCCCGA GACGCATGAC TATCTGGCCG GACTGGGTGC CACGGGTTTC
GTGGATCGCG CTACGCTGGC CGGAAAGGGC GGCCCGCTGC AAAAGGAACG CTGGGCGGGG
GCGGTGGACA GCGTGGGCTC CACCACGCTG GCCAATGTGC TGGCGCAGAC CAATTACGGC
GGCGCGGTCG CGGCCTGCGG GCTGGCAGGC GGCTTTGACC TTCCGGCGAC GGTCATGCCG
CATATCCTGC GCGGGGTGGC GCTCCTGGGA ATCGACAGCG TGATGGCGCC GCAGGCGAGG
CGCGACCGGG CCTGGGCGAC GCTGGCCGCG CATCTGGACA AGGCGCATCT GGCCAGCATC
GCCCGGGTCG AACCGATGTC GCAGTTGCCT GCGCTTGCGG CGGACATCGT TGGGGGCCGG
ATCCGGGGCC GGGTGGTCAT CGACGTGGCC GGATAG
 
Protein sequence
MTETFRALMI EDRDGKPVAG FRDLTRDALP DHEVLVEVAY STLNYKDGLA VTGKGRIARR 
LPMVAGIDLA GTVVESRSDR WQPGDKVIVN GWGLSETEWG GYSRFQRLKP EWLTRLPEGF
SLQDAMAIGT AGYTAALCVD ALEDWGAIQP GGPEVLVTGA AGGVGSTAIS LLAAKGYTVT
AATGRPETHD YLAGLGATGF VDRATLAGKG GPLQKERWAG AVDSVGSTTL ANVLAQTNYG
GAVAACGLAG GFDLPATVMP HILRGVALLG IDSVMAPQAR RDRAWATLAA HLDKAHLASI
ARVEPMSQLP ALAADIVGGR IRGRVVIDVA G