| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1104 |
|---|
| Symbol | |
|---|
| ID | 4580438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1079858 |
|---|
| End bp | 1080391 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639768423 |
|---|
| Product | 4-vinyl reductase, 4VR |
|---|
| Protein accession | YP_914908 |
|---|
| Protein GI | 119383852 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCCG CTGTTCAGAT CGACGTGGAC GAAGCCAGTG GTATCTGGCG CACCGACGGC
CTGCCCATGG TCTATGTTCC GCGTCATTTC ATGGTGAACA TGCACAAGGA AATCGAAAAG
ACCCTGGGAC GCGATGCCTA TGAGGCGATG CTGGACCGCT CTGGCGCGAA GTCGGCCTTT
TTCTGGTGCA AGCGCCAATC CGAACTGCTG GGTGCATCCG AGCGCGATGT CTTTGCGCTT
TATCTGCGGC GGCTTTCGGA ACGTGGTTGG GGCCGCTTTT CCATCGAGCA ACTGGACCTG
GACCAACTGG CGGCCCAGGT CACGCTGAGG GATTCGATCT ATGTGCTCGA GTCGGAAGGG
CAGGCGGCCG CGCCCACCTG CTATATGTTC GAGGGCTTCC TGATCGGCGC CATGCAGTTT
GTCTGCGCCA TGCGCGGCAT CGATCCGCAG GCGATCACCT GTCGCGAGGT GCAATGCGCG
GCCATGGGCG CCGCCGAATG CCGCTTTGAG GTCTCCTGCG TCCTGACGGA CTGA
|
|---|
| Protein sequence | MQPAVQIDVD EASGIWRTDG LPMVYVPRHF MVNMHKEIEK TLGRDAYEAM LDRSGAKSAF
FWCKRQSELL GASERDVFAL YLRRLSERGW GRFSIEQLDL DQLAAQVTLR DSIYVLESEG
QAAAPTCYMF EGFLIGAMQF VCAMRGIDPQ AITCREVQCA AMGAAECRFE VSCVLTD
|
|---|
| |