Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1100 |
Symbol | |
ID | 4578796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1075249 |
End bp | 1076409 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768419 |
Product | major facilitator transporter |
Protein accession | YP_914904 |
Protein GI | 119383848 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGCA CAGATTTTCC GCAGCGCGAG CGGATCACCC TGTTGGCGTG CTTTCTTGCG GGTGGCCTTG GCATCGGCAG TTGGGGCGCC AACCTGCCGG CGTTGGGTCG GCGGGCAGGG TTGGATGAAG GTGCGCTGGG GCTGGTTCTG CTATCCTTCG CGGCCGGCGC TATCCTGGCG ATGACCAAGG CGCCGCCGGT GATCGCCAGG ATCGGGGCCG AGCGGCTTTC GGTAATCGCC GCCGGATTGT TCGGGCTGGG TATCATTGGC ATCGGCTGGG TGACGCAGAT GGCCGCCGCG GTGATCCTGG CAAGCCTTGC CGGTCTCGTC TTTGGTGCGC TGGACGTGGC GATGAACAGC CAGGCGTCCT ATCTTGAACG GCGCGCAAGG CGGCCAGTCA TGTCCTCGTT TCACGCCATG TTCAGCGCTG GCACGCTGAT CGGCGCACTG ACCTATGCGG CGCTGGCGCA TCGCGGCGTC GGGAACGGTT CGATCCTGTC GCTGTCGGGC AGCGTGATCG TGGTGATCGC GGTTGCCGCG TTCACCCGCA CGACTGTTGC CGTGGCAGAG CCGGCGAACG ATGCCACGAC CGCCAGAAGC CGTGCCAGGC CAGGAATTGC GGTGCTGGTG CTGGGTACGC TGGCCTTCGT GATTTTCCTG GCCGAAGGCG CGATCATGGA TTGGGCTGCC GTCTATCTGG TGCGGGTCAT CGGCACATCG GAAAGCATCG GTGCGGCCGG ATATGCGATC TTTGCGGGCA TGATGCTGTT GGGCCGGCTG CTGGGGGACC GGGCCAACCG CGCTTTAGGC CCATCGCGAT TGTTTCGGAT CTCGGTCGCC GCGGTGGCGC TATCCATGGC GGCGTTCTTG CTTTCTGGTT CGGTCTATCT GGCCTTTGCG GCGCTTGCCT GCAGCGGACT GGCGATGGCG AATGTCATCC CGCTGATCTT CTCGGCCGCG GGTATGCTTG GCGCGAGGGA CGGTGGGCGT TCGCTGTCTC GGGTGATTTC GATGGGTTAT GCCGGAATCC TGTTGGGTCC GGCACTGATT GGTTTCCTGG CCCAGGCGGT TTCCCTGACG GCGAGCCTTT CACTGGTTCT GGTGGGTCTC GCGGCGGTGG CATTCTTCGG CCGGCATTTC AAGGAGGGGA TATTGTCCTA G
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Protein sequence | MAGTDFPQRE RITLLACFLA GGLGIGSWGA NLPALGRRAG LDEGALGLVL LSFAAGAILA MTKAPPVIAR IGAERLSVIA AGLFGLGIIG IGWVTQMAAA VILASLAGLV FGALDVAMNS QASYLERRAR RPVMSSFHAM FSAGTLIGAL TYAALAHRGV GNGSILSLSG SVIVVIAVAA FTRTTVAVAE PANDATTARS RARPGIAVLV LGTLAFVIFL AEGAIMDWAA VYLVRVIGTS ESIGAAGYAI FAGMMLLGRL LGDRANRALG PSRLFRISVA AVALSMAAFL LSGSVYLAFA ALACSGLAMA NVIPLIFSAA GMLGARDGGR SLSRVISMGY AGILLGPALI GFLAQAVSLT ASLSLVLVGL AAVAFFGRHF KEGILS
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