Gene Pden_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1084 
Symbol 
ID4578781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1058320 
End bp1058490 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content65% 
IMG OID639768404 
Productconjugal transfer protein 
Protein accessionYP_914889 
Protein GI119383833 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3701] Type IV secretory pathway, TrbF components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCGG GTATCCGACT GCTTGTTGTC GGCCCGCTGT CTGCGACGGA ACGCTGGACC 
GCCATCCTGA CCGTGATGCT GCAGACGTCC CGCAGCGCCG AGGCCCTGCG CGCCAATCCG
CTCGGCATCT ACGTCAATGC GATCTCATGG TCGCGGGAGA CAAGCCAATG A
 
Protein sequence
MPAGIRLLVV GPLSATERWT AILTVMLQTS RSAEALRANP LGIYVNAISW SRETSQ