Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1077 |
Symbol | |
ID | 4580276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1051385 |
End bp | 1052533 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639768397 |
Product | ABC transporter related |
Protein accession | YP_914882 |
Protein GI | 119383826 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGGTT TGCGGCTGTC GAACATCGGC AAGAGCTATG GCGAGACCAG AGTCCTGTCG GGTATCGACC TCGACATCGC GGTGGGCGAA TTCGTGGCCG TGCTTGGCCC CTCGGGCTGC GGCAAGACCA CGCTGCTGCG GCTGGTTGCA GGCTTTGACC GTCCCGATGA AGGCACGATC ACCCTGGGCG ACCGGCAGGT GGCGGGTGGA AATGTCATGG TGCCGCCCGA AGGGCGCGGC ATCGGCATCG TGTTCCAGAA CTACGCGCTG TGGCCGCATA TGTCGGTGGC GGAAAATGTC GGCTATGCGC TGAAGGTGGC GCGCCTGCCC CGGGCCGAAC GCGAGGCCAG GGTGGCCCGG GCGCTGGACA CCGTCAACCT GGCGCCCTTT GCCGGCCGTC GCCCGGCTGA TCTGTCGGGC GGGCAACGCC AGCGGGTCGC GCTGGCCCGC TGCCTGGCCG CCGGTTCGGA TCTGGTGCTG CTGGATGAGC CGCTGGCCAA CCTGGATGTG CATCTGCGCG CCACGATGGA AGACGAGTTC CACCGCTTCC ACCGCGAAAG CGGGGCGACG CTGGTCTATA TCACCCATGA CCAATCCGAG GCGATGGCCC TGGCCGACCG CATCGCGGTG ATGGACAAGG GCCGCCTGCT GCAATGCGCC AGCCCCCGGC AACTATATCG CGAACCTGCC GACGCCACGG TGGCCGGTTT CATAGGGGGC GGGCTGGTGC TGCCGGTCGA GGGCCTGCGC CCCATGGGGA ACGGGCTTGC CATGGCCGAT CTTCTGGGAA CGCGCGTCCG GCTGCGCTGC CATGCCGGGG AAACCGCCCG GCCATTGGCC ATGGCCTCGA CCCATCCCGC CGATATCCAG CCCGTCCATC CGGGCGAGGC CGGCATCCCC GCCCGTGTCA CCGCCCGCAC CTATCGCGGC GGCAGCTGGT CCTATGAGCT GCGCCCCGAG ACGGATCCGT CCCTCCGGCT GCCCATGGTG CTGCCCGACA CGGCCACGCC GCCCGAACCG GGCGCGCGCC TTGACCTGGC GTTCCGCGAC CTCTGGGCCA TCCCGCTTTC CGGCACCTCC GCTCCCGGCG CGGCGCCGAT CCCTTCCTCC TCCTCTTCGC ATCTTACGGA GCAATTCCAA TGCGCCTGA
|
Protein sequence | MTGLRLSNIG KSYGETRVLS GIDLDIAVGE FVAVLGPSGC GKTTLLRLVA GFDRPDEGTI TLGDRQVAGG NVMVPPEGRG IGIVFQNYAL WPHMSVAENV GYALKVARLP RAEREARVAR ALDTVNLAPF AGRRPADLSG GQRQRVALAR CLAAGSDLVL LDEPLANLDV HLRATMEDEF HRFHRESGAT LVYITHDQSE AMALADRIAV MDKGRLLQCA SPRQLYREPA DATVAGFIGG GLVLPVEGLR PMGNGLAMAD LLGTRVRLRC HAGETARPLA MASTHPADIQ PVHPGEAGIP ARVTARTYRG GSWSYELRPE TDPSLRLPMV LPDTATPPEP GARLDLAFRD LWAIPLSGTS APGAAPIPSS SSSHLTEQFQ CA
|
| |