Gene Pden_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1075 
Symbol 
ID4580274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1049814 
End bp1050566 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID639768395 
ProductABC transporter related 
Protein accessionYP_914880 
Protein GI119383824 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC CCGTTCCCAC GGACCCCGTC ATCAGGCTGA CCGAGGTCAA CAAGCATTAC 
GGCAATTTCC ACGCGCTGCG CGATGTGAGC CTTGAGGTCG CGAAGGGCGA AAAGATCATC
ATCTGCGGCC CCTCGGGTTC GGGAAAGTCG ACGCTGATCC GCTGCATCAA CCGCATCGAG
CGGCACGACA GCGGCGAAAT CCTGGTCGAC GGCCACCGCC TGACCGGGGA CACCAAGGAT
GTCGCCGCCA TTCGCCGCGA GGTCGGCATG GTTTTTCAGA GCTTCAACCT GTTCCCGCAT
ATGACCATCC TGGAAAACTG CACCATCGCC CCGCGCAAGT CGCGCGGCCT GGGCAAGGCC
GAGGCGGAAG AGCGCGCCAT GCATTACCTG ACCAAGGTGC GCATTCCCGA CCAGGCCGGA
AAATATCCCG GCCAGCTTTC CGGCGGCCAG CAGCAGCGCG TCGCCATCGC GCGGGCGCTG
TGCATGCAGC CGCGGGTGAT GCTTTTCGAC GAGCCGACCT CGGCGCTGGA CCCCGAGATG
GTCAAGGAGG TGCTCGACAC CATGGTGGAA CTGGCCGAAG AGGGCATGAC CATGCTTTGC
GTCACGCATG AGATGGGCTT TGCGCGGCAG GTCGCCGACC GGGTGATCTT CATGGATCGC
GGTGAAAAGA TCGAGGAAGC GGCGCCCGGC GCTTTCTTCA CCAACCCGCA AAGCCCGCGC
GCGCGTGAGT TCCTGCAACA GGTCATTCAC TGA
 
Protein sequence
MNSPVPTDPV IRLTEVNKHY GNFHALRDVS LEVAKGEKII ICGPSGSGKS TLIRCINRIE 
RHDSGEILVD GHRLTGDTKD VAAIRREVGM VFQSFNLFPH MTILENCTIA PRKSRGLGKA
EAEERAMHYL TKVRIPDQAG KYPGQLSGGQ QQRVAIARAL CMQPRVMLFD EPTSALDPEM
VKEVLDTMVE LAEEGMTMLC VTHEMGFARQ VADRVIFMDR GEKIEEAAPG AFFTNPQSPR
AREFLQQVIH