| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1074 |
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| Symbol | |
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| ID | 4580273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1049107 |
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| End bp | 1049799 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639768394 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_914879 |
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| Protein GI | 119383823 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC TTGATTTCTC GGTCGTCGTC GATGCCCTGC CTTTCCTGTG GAAGGGGCTG
CAATTCTCAC TGCTGCTGAC CGCCGTCGCC TTTGTCGCCG GGCTGGTGCT GGGAACCGGG
CTGGCGCTGG TCCAGCATCT GCAGGTGCCG GTGCTGGCGC AGCTCGCCAA GGGCTATGTG
GCGCTGATCC GCTCGATCCC GCTGATCATG GTGCTGTTCT GGTTCTTCTT CCTGGTGCCC
TTGATCGCGG GCTGGATGTT CAACAACGGC CGGCCGATGC CGGTGGGCGG GGTGCTGACG
GCCTTTCTGA CCTTCTCGCT GTTCGAGGCG GCCTATTATT CCGAGATCAT CCGCGTCGGC
CTGCGCTCGG TTGGCAAGGG TCAATACGAG GCCGCCGACG CGCTGTCGCT TTCGACCTTG
CAGACCTATC GGCACATCAT CCTGCCGCAG GTGTTCCGGG TGACCTCGCC GATCATCCTC
AGCCAGACCA TCATCCTGTT CCAGGATACT TCGCTGGTCT ACGTCCTGTC GCTGACCGAC
CTGGTGGGCG CGGCCTCCAA GGTGGCGCAG CTGAACGGCC GGCTGGTCGA AATGTATCTG
ACCGTGGCGG CGGTCTATCT GGTGATCTGC ACCTCCGCCT CGCAACTGGT CGCGGTCCTG
CGCAAGCGCA CCCGCATCGC CACCAACCGC TAG
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| Protein sequence | MNALDFSVVV DALPFLWKGL QFSLLLTAVA FVAGLVLGTG LALVQHLQVP VLAQLAKGYV
ALIRSIPLIM VLFWFFFLVP LIAGWMFNNG RPMPVGGVLT AFLTFSLFEA AYYSEIIRVG
LRSVGKGQYE AADALSLSTL QTYRHIILPQ VFRVTSPIIL SQTIILFQDT SLVYVLSLTD
LVGAASKVAQ LNGRLVEMYL TVAAVYLVIC TSASQLVAVL RKRTRIATNR
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