| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1073 |
|---|
| Symbol | |
|---|
| ID | 4580272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1048349 |
|---|
| End bp | 1049110 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639768393 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_914878 |
|---|
| Protein GI | 119383822 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACG TGCTTTTTCA ACCTGCGATA GACGGGCAGC TTTACATCCA GTGGCTGCTG
TCGGGCTTGA TGTGGACGCT GCTTCTGGCT GTCGGCGGCT GGTGGATCGC CTTTGCCATC
GGCGTGCTGG TGGGCGTCGG GCGCACCAGC CGCAACCGCG CCGTCGCCCT GGCCGCGCGG
CTTTATGTCG AGGTCTTTCG CAACATCCCG GTGCTGGTGC AGATGTTCCT GTGGTATTTC
GTGCTGCCCG AGCTTCTGCC CACGGGCCTG GGCGACCGGA TCAAGCAGAT GCCGCCGCCC
TGGGGCGCCT TTTTCCCGGC GCTGGCCTGT CTCGGCCTCT ATACCGCGGC GCGCATCGCC
GAGCAGGTGC GGGCGGGCAT CGAGGCGCTG CCGGCCGGCC AGGACGAGGC TGCCGCCGCG
CTGGGGCTTT CGCCTTGGGC CGCCCGGCGC CACATCATCG TGCCGCAGGC TCTGCGGCTG
ATCGTTCCCA GCCTGACCAG CGAGGTGATG GGGATCTACA AGAACACCTC GGTCGCCCTG
ACCATCGGCC TGTTGGAGTT GACTGCGCAG GCGCGGCAGA TCTCCGAGGC GACCTTCCAG
ACCTTCGGCG CCTTCGCGGC GGCGACGATC ATCTACCTGC TGCTGGCGCT GGTCGCCTAT
CGGCTGATGC TGTGGATCGA CCGCCGCTTC CAGATCCCCG GCAGCGCGCC GGCCCGCAAG
GCGCGCCGTC TTCCCATCCT GCGTCGCGGA GGTGCGCTAT GA
|
|---|
| Protein sequence | MFDVLFQPAI DGQLYIQWLL SGLMWTLLLA VGGWWIAFAI GVLVGVGRTS RNRAVALAAR
LYVEVFRNIP VLVQMFLWYF VLPELLPTGL GDRIKQMPPP WGAFFPALAC LGLYTAARIA
EQVRAGIEAL PAGQDEAAAA LGLSPWAARR HIIVPQALRL IVPSLTSEVM GIYKNTSVAL
TIGLLELTAQ ARQISEATFQ TFGAFAAATI IYLLLALVAY RLMLWIDRRF QIPGSAPARK
ARRLPILRRG GAL
|
|---|
| |