Gene Pden_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1071 
Symbol 
ID4580270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1046186 
End bp1047334 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content67% 
IMG OID639768391 
Productaminotransferase, class V 
Protein accessionYP_914876 
Protein GI119383820 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTATG ACGTTGCCGC GGTGCGGCGA CTTTTCCCGG CGGTAGAGCG GATGACCTAT 
CTGGATGCGG GCTTTCAGTC GCCGCTATCC GTGCCGGTGA AAGAGCGGCT CGAGGCGTTC
ATCGCCTCTT CCTTCGACAC TGCCGGCCCC AAGTCCGAAT GGCTTTCGGG CATGGAGGCG
GTGCGCGGCC AGTTGGCCGC ATTCGTGAAC GCCGCACCCG AAGAGATCGC CTTTACCAAG
AACACCTCGG AGGCGATGAA CATCGCCGCC AACGCCCTGC CGCTGGAAGC CGGGGACGAG
GTGCTGATGC TGGAGGGCGA TCATCCGAAC AACGCCTATG CCTTCCTGAA CCTGGCCCGC
AAGGGCGTCG AGACGCGCTT CCTGCCGATG CCCGAGGTCG TGGACGGTGC ATTCTTCGAG
CGGCACCTGG GCGAGCGGAC ACGCGCCATC TCGATGTCGC TGGTGACTTT CCATGCCGGG
CATCTGTTCG ATGTCGAAAG CGTCGGCCGC CTGTGCCGGG AACGCGGGCT TTTCTTCGTC
GTGGACGTGA TGCAGGGCAT CGGCGTGGTG CCGGTGGACG TCAAGAAGAT CGGTGCCACC
TTCGTCGGCT CGGGCACCCA CAAGGGGCTG TTGCTGCCGC AGGGGCTGGG CTTTCTGTAC
TGGAACCGCA AGGCGGTCGA TGCCCAGCCC AGCTACATGG CCGCGATCAC CCTGGAAAAC
CCGCCCGCCG ACCTGATCGC GCGGCATGAC AACATGACCG TCGCCAGCAC CGCCCGCCGG
TTCGAGATCG GCAACTTCAA CCTGCCCGCC GTGCTGGGGC TGGGCGGGGC GCTGGAGCTG
CTGGACGCCA TCGGCGTCGC CGAGATCCAG GAGCATTGCC ATGCCCTGGG CGACCGGCTG
ATCGCCGGGC TGGACCGGCT GGGCGTCGGG CTTGTCGGCC CGCGGGCGCG GGCGCATCGC
GCGCCGCATA TCTATGTCGC CGCGCTGCCC GCCGCGGAAT GGCTGCCCTA TTTCGCCGAG
CAGAACATCC GTCTTTCGCC CGAACGGGAC GGGGTCCGCA TCTCGCTGGG CCTGTTCAGC
ACCGAGGCGG ACATCGACCG TTTCCTCGAC GCGGTCGAGG CCCGGCTGCG CGCAAGCGCC
GCCGCCTGA
 
Protein sequence
MSYDVAAVRR LFPAVERMTY LDAGFQSPLS VPVKERLEAF IASSFDTAGP KSEWLSGMEA 
VRGQLAAFVN AAPEEIAFTK NTSEAMNIAA NALPLEAGDE VLMLEGDHPN NAYAFLNLAR
KGVETRFLPM PEVVDGAFFE RHLGERTRAI SMSLVTFHAG HLFDVESVGR LCRERGLFFV
VDVMQGIGVV PVDVKKIGAT FVGSGTHKGL LLPQGLGFLY WNRKAVDAQP SYMAAITLEN
PPADLIARHD NMTVASTARR FEIGNFNLPA VLGLGGALEL LDAIGVAEIQ EHCHALGDRL
IAGLDRLGVG LVGPRARAHR APHIYVAALP AAEWLPYFAE QNIRLSPERD GVRISLGLFS
TEADIDRFLD AVEARLRASA AA