| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1057 |
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| Symbol | |
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| ID | 4578637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1035142 |
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| End bp | 1036530 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639768377 |
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| Product | putative deaminase |
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| Protein accession | YP_914862 |
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| Protein GI | 119383806 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.938222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACACCG AGCACCGCCA CAGCCGCCGC GCCTTCCTGT GCGGCACCGG GGGGCTGATG
ACCGCATCGG CCGTGATGGG CATGGGAGCC GCCAGCGCCG CAGGAGCCGC CGCCGGGGCC
GCCGAGGAAC TGGCGCTGAC CGGCGAGATC GCCGAGACGC ATTACTACCT GACCGAGGTC
CGGCTTGAAA ACGGCTTCGA GCGCGAGGGC GAATACATCA CCGCCACTCG CACCGCGCTG
CATACGCTGG AAATCCGCGA CGGCAGCATC CAGGCGATCC TGGAGGAAGG CGCCGCGCTG
ACGCCGGACG TCCCGCGCTA TTCGGCCGGG GGCAAGCTGG CGCTGCCGGC CTTTCGCGAC
ATGCATATCC ACCTGGACAA GACCTTCTAT GGCGGGCCGT GGCAGGCGCC GCTGCCCCGG
CAGGGCAAGA CGATCATGGA CATGATCGCG CGCGAGGAAA TCCTGCTGCC GAAGCTGTTG
CCCACCTCGC AGCAGCGGGC CGAGGCGCTG ATCGATCTGC TGCTGTCGCA AGGCACGACC
GTGGCGCGCA GCCATTGCAA CATCGACCCG GTCAGCGGGC TGAAAAGCTT GGAGCATCTG
CAACTTGCGC TGGAAAAGCA CCGCGACCGC TTCGAATGCG AAATCGTGGC CTTCCCGCAG
CACGGCCTGT TGCATTCCAA GGTGGACGGG CTGATGCGCG AGGCGATGGC CATGGGCGTG
CAATTCGTCG GCGGGCTGGA CCCGACCAAC GTGGACGGCG CGATGGAGCA GTCGCTGGAC
GCGATGTTCC AGATCGCGCT GGACCACGAC AAGGCGGTGG ACATCCACCT GCACGAAACC
GGCCCCTCCG GCACCGCCGC GATCAACTAC ATGGTCGAGA CGGTCGAGCG CACCCCGCAA
CTCAAGGGCC GGCTGAACCT GAGCCACGCC TTCGCGCTGG GAACGCTGCC CGAGGCCGAA
CTGGACGCGC TGGCCGAGCG CATGGCGGAG CAGGGCGTCA CGGTGATCTC GACCGTGCCC
ATCGGGGCGC TGACCATGCC CCTGCCGCGC CTGCGCGAAA AGGGCGTGGC TCTGATGACC
GGCACCGACA GCGTGATCGA CCACTGGTCG CCCTTCGGCA CCGGCGACAT GCTGGAAAAG
GCCAATCTCT GCGCACAGCT TTACGGCGTG CGCGACGAGT TCGGCCTGAC CCGCGCCATG
GCCATCGCCA CCGGCGACGT GCTGCCGCTG GACGATGCGG GCGACCGCGC CTGGCCGAAA
CCCGGCGATG CGGCGGAATT CGCGCTGGCC GAGGCCAGTT GCTCGGCCGA GGCGGTAGCC
CGGCGCTCGG CCCGCAGCGC TACCTTCCAC AAGGGCCGGC TGGTCTACGG CGGCGTCGCC
CAAGCCTGA
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| Protein sequence | MHTEHRHSRR AFLCGTGGLM TASAVMGMGA ASAAGAAAGA AEELALTGEI AETHYYLTEV
RLENGFEREG EYITATRTAL HTLEIRDGSI QAILEEGAAL TPDVPRYSAG GKLALPAFRD
MHIHLDKTFY GGPWQAPLPR QGKTIMDMIA REEILLPKLL PTSQQRAEAL IDLLLSQGTT
VARSHCNIDP VSGLKSLEHL QLALEKHRDR FECEIVAFPQ HGLLHSKVDG LMREAMAMGV
QFVGGLDPTN VDGAMEQSLD AMFQIALDHD KAVDIHLHET GPSGTAAINY MVETVERTPQ
LKGRLNLSHA FALGTLPEAE LDALAERMAE QGVTVISTVP IGALTMPLPR LREKGVALMT
GTDSVIDHWS PFGTGDMLEK ANLCAQLYGV RDEFGLTRAM AIATGDVLPL DDAGDRAWPK
PGDAAEFALA EASCSAEAVA RRSARSATFH KGRLVYGGVA QA
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