Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1050 |
Symbol | |
ID | 4578631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1028486 |
End bp | 1029556 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639768372 |
Product | ABC transporter related |
Protein accession | YP_914857 |
Protein GI | 119383801 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.125219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTATCC AGATCAACAA CGTCTACAAG CGTTTCGGCA GCCTGACGGT TGTCAACGGT GTCTCGGTCG ATATCGCGGA TGGCGAGTTC TTCGTCATGC TCGGCCCTTC GGGCTGCGGC AAGACCACCA CCCTGCGCAT GGTCGCGGGG CTGGAAACCG CCAGCGAGGG CCAGATCTTC ATCGACGGCC GCGACATGAC CCATGCCGAG CCGCGCCACC GCGACATCGC CATGGCCTTT CAGGATTACG GCCTCTATCC CAACATGACG GTGTTCCAGA ACATCGAGTT TCCTCTGAAG ATCCGCAAGC TCGCTCCCGC CGAGCGGCGC AGGAAGGTCG AGGAGACGGC GGGCCGCCTG GGCATTTCCG ACTATCTCGG CCGCAAGCCG GCGCAGATGT CGGGTGGCCA GCGCCAGCGG GTGTCGCTGG CGCGCGCGCT GGTGCGCAAT CCCAAGGTGT TCCTGATGGA CGAGCCGCTG TCGAACCTCG ACGCCAAGCT GCGCGCGGTG ATGCGGACCG AGATCAAGAA GCTGGTCACC GACCTGGGCA TCACCACCAT CTATGTCACC CATGACCAGA TCGAGGCCAT GTCGATGGCC GACCGCATCG CCGTCATGCG CAAGGGCGAC ATGGTGCAGG TGGCGCCGCC GCTTCAGGTC TACGACCGTC CGGCGACCTG TTTCGTCGCG GATTTCATCG GCTCGCCGCC GATGAACCTG TTCAAGGCCG AGCTGGCCAA CAATGGCCGC GTCGTCTGCC AGGTACAGGG CTTCGGCGAC GCATTGGACG ATGGCGAGCG CGACCGTGCC CGCGCCATGG CCGACCGTCA CGGCCATTTC GCCGTCGGAA TCCGCCCCGA ACATCTGCAA TGCGTCGCTG CCGGCACGCC CGGCTCGGTC GAGGGCATCG TCGAGCTGGT CGAGCCGCTG GGTCAGACCA CCAACATCTA TCTGCTGTCG GGCGACACGA AATATGTCGT GGTGACCGAC CGCACCACCC TCCGCGCCGG AGACACGATC GGGGTCATCG CCCCGGGCGA CAAGGTCCGC GCGGTGGGTC TTGATCGCTG A
|
Protein sequence | MAIQINNVYK RFGSLTVVNG VSVDIADGEF FVMLGPSGCG KTTTLRMVAG LETASEGQIF IDGRDMTHAE PRHRDIAMAF QDYGLYPNMT VFQNIEFPLK IRKLAPAERR RKVEETAGRL GISDYLGRKP AQMSGGQRQR VSLARALVRN PKVFLMDEPL SNLDAKLRAV MRTEIKKLVT DLGITTIYVT HDQIEAMSMA DRIAVMRKGD MVQVAPPLQV YDRPATCFVA DFIGSPPMNL FKAELANNGR VVCQVQGFGD ALDDGERDRA RAMADRHGHF AVGIRPEHLQ CVAAGTPGSV EGIVELVEPL GQTTNIYLLS GDTKYVVVTD RTTLRAGDTI GVIAPGDKVR AVGLDR
|
| |