Gene Pden_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1050 
Symbol 
ID4578631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1028486 
End bp1029556 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content65% 
IMG OID639768372 
ProductABC transporter related 
Protein accessionYP_914857 
Protein GI119383801 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.125219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCC AGATCAACAA CGTCTACAAG CGTTTCGGCA GCCTGACGGT TGTCAACGGT 
GTCTCGGTCG ATATCGCGGA TGGCGAGTTC TTCGTCATGC TCGGCCCTTC GGGCTGCGGC
AAGACCACCA CCCTGCGCAT GGTCGCGGGG CTGGAAACCG CCAGCGAGGG CCAGATCTTC
ATCGACGGCC GCGACATGAC CCATGCCGAG CCGCGCCACC GCGACATCGC CATGGCCTTT
CAGGATTACG GCCTCTATCC CAACATGACG GTGTTCCAGA ACATCGAGTT TCCTCTGAAG
ATCCGCAAGC TCGCTCCCGC CGAGCGGCGC AGGAAGGTCG AGGAGACGGC GGGCCGCCTG
GGCATTTCCG ACTATCTCGG CCGCAAGCCG GCGCAGATGT CGGGTGGCCA GCGCCAGCGG
GTGTCGCTGG CGCGCGCGCT GGTGCGCAAT CCCAAGGTGT TCCTGATGGA CGAGCCGCTG
TCGAACCTCG ACGCCAAGCT GCGCGCGGTG ATGCGGACCG AGATCAAGAA GCTGGTCACC
GACCTGGGCA TCACCACCAT CTATGTCACC CATGACCAGA TCGAGGCCAT GTCGATGGCC
GACCGCATCG CCGTCATGCG CAAGGGCGAC ATGGTGCAGG TGGCGCCGCC GCTTCAGGTC
TACGACCGTC CGGCGACCTG TTTCGTCGCG GATTTCATCG GCTCGCCGCC GATGAACCTG
TTCAAGGCCG AGCTGGCCAA CAATGGCCGC GTCGTCTGCC AGGTACAGGG CTTCGGCGAC
GCATTGGACG ATGGCGAGCG CGACCGTGCC CGCGCCATGG CCGACCGTCA CGGCCATTTC
GCCGTCGGAA TCCGCCCCGA ACATCTGCAA TGCGTCGCTG CCGGCACGCC CGGCTCGGTC
GAGGGCATCG TCGAGCTGGT CGAGCCGCTG GGTCAGACCA CCAACATCTA TCTGCTGTCG
GGCGACACGA AATATGTCGT GGTGACCGAC CGCACCACCC TCCGCGCCGG AGACACGATC
GGGGTCATCG CCCCGGGCGA CAAGGTCCGC GCGGTGGGTC TTGATCGCTG A
 
Protein sequence
MAIQINNVYK RFGSLTVVNG VSVDIADGEF FVMLGPSGCG KTTTLRMVAG LETASEGQIF 
IDGRDMTHAE PRHRDIAMAF QDYGLYPNMT VFQNIEFPLK IRKLAPAERR RKVEETAGRL
GISDYLGRKP AQMSGGQRQR VSLARALVRN PKVFLMDEPL SNLDAKLRAV MRTEIKKLVT
DLGITTIYVT HDQIEAMSMA DRIAVMRKGD MVQVAPPLQV YDRPATCFVA DFIGSPPMNL
FKAELANNGR VVCQVQGFGD ALDDGERDRA RAMADRHGHF AVGIRPEHLQ CVAAGTPGSV
EGIVELVEPL GQTTNIYLLS GDTKYVVVTD RTTLRAGDTI GVIAPGDKVR AVGLDR