| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1047 |
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| Symbol | |
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| ID | 4578628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1025338 |
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| End bp | 1026639 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639768369 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_914854 |
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| Protein GI | 119383798 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGAT TCCAGTCCCG TTCCGACTTT ACCCGCCGGC ACATGCTCAA GACGCTGACG
GCCCTGACGG CTGCCTTTGC GGCCGCGCCG CGCGGCGCCT TTGCGCAATC CGGGGCGGCG
CTCAACATTC TCAACAGCAA TACCGCATGG GCGGAGGCTC TGACCGCATC GGTCGCCGAT
GCCTATGACA GCGCCCGGAT CACCGGCGAG GCCAATCCCT ATGAGGCACA TTACGAAAAG
CTGCTGATCG AGCTTAGCCA GGGTTCCTCG ACCTTCGACC TGTTCACCAC CGACAATCTC
TGGATCCGCC AACCGATCCG CAACGGCTGG GCTGCGCCGC TGGACGAGAT CCGGGCGGGC
AACGCCGAAC TGCCCGAACT GCAACTGCAC AACTTCGCAC CCGCCTCGCT GACCTATACC
GAGTACGAGG GAAAACGCTG GGGCTTGCCG CTGGTGATGA CCACGCCGGT CTTCGTCTAT
CGCAAGGATC TGCTGGAAGC GGCCGGCATC GAGGTGCCGA AGAACTGGGA CGATTATCGC
GAGGCGGCGG CGAAGCTGCA TTCCTCGGAT GTCGCGGGCA ACGTGTTGCT GCTGGGAGGC
CAGGACGCGC ACATGAGCGG TGACTGGGGG TCGCGCCTGA TGGGCATGAC CAAGATCGCC
CCCAATGACG ACGGCGTGCT GGACGAAGCC AACAAGCCGG TTTTCAACAG CGAAGGGCAG
GGGGCCCGCG CCATCGAGCG GCTGCGCGAG GTGCTGCCCT ATACCCCGAA CGGGGTCGAG
GGGCTGGACT ATGCCGAGGG CTCGTCGTTG ATGCAGCAGG GCCGCGCCGC CATGATGATC
ACCTGGTCGG ACGTGATCGT CGGCATCGAG GATGGGCCGA TGAAGGGCCG TTTCGGCTAT
ACCGTCGCCC CGACCGAGCG ATATGAGCAG CAGATGGTTG GTGGCTGGTC GATCATGGCC
AACGCAGCCT CCGGGCAACT CGAGGATGCC TATCGCTTCC TCGCCTGGAT GAGCGAGGGC
AAGGCCTATG AGTTGTTCCG CGAGGGCGGG GAATCCTCGC TTTGCCTGCA GCGCGACATC
GACAACCCCC AGACGGTCGA GGCGATTCCC ATGTTGCAAG CCTTCCACGA CTTCGAGACC
CGCGGCACCG CGCCGATCTC GATCCCGCCC TATCGGTTGC AGAACGCCGT CGAGGTGCAG
CGCGTGCTTT ACGAAGAGAT CCTGGCGGGC GTGAACGGCC GCAAGACCCC CGAACAGGCG
ATGGCGGATG CCGAATCGCG CCTGGCGCGG GTCATTCGCT GA
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| Protein sequence | MTRFQSRSDF TRRHMLKTLT ALTAAFAAAP RGAFAQSGAA LNILNSNTAW AEALTASVAD
AYDSARITGE ANPYEAHYEK LLIELSQGSS TFDLFTTDNL WIRQPIRNGW AAPLDEIRAG
NAELPELQLH NFAPASLTYT EYEGKRWGLP LVMTTPVFVY RKDLLEAAGI EVPKNWDDYR
EAAAKLHSSD VAGNVLLLGG QDAHMSGDWG SRLMGMTKIA PNDDGVLDEA NKPVFNSEGQ
GARAIERLRE VLPYTPNGVE GLDYAEGSSL MQQGRAAMMI TWSDVIVGIE DGPMKGRFGY
TVAPTERYEQ QMVGGWSIMA NAASGQLEDA YRFLAWMSEG KAYELFREGG ESSLCLQRDI
DNPQTVEAIP MLQAFHDFET RGTAPISIPP YRLQNAVEVQ RVLYEEILAG VNGRKTPEQA
MADAESRLAR VIR
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