Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1043 |
Symbol | |
ID | 4578624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1020799 |
End bp | 1021344 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768365 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_914850 |
Protein GI | 119383794 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCGC CGAAAAAACC CGAATGGGCC GCCGATCCCG AAAACAACCT GGGCCAGGTG CTGGTTCTCG GCCCGCAAGA GGGCAAGAAT TTCTACCAGC CCGTGCCCGC CAACGGCAAT ATCTCGGTCC GCATCGCGCC GGAATTCGTC GATATCCAAA GCCCGTTCAG CATCGGCACC CAAACCCTGC CGCCCGGCGG CTATGTGCGC GAGCATTCGC ACCCCGAACA TGACGAAGCA CTTCATTTCA TCCGCGGCAC CGGCAAGGCC GTGGTGGACG GCGTCGAATA TACGATCGAG CCGGGCGTGA CGATCTTTGT CGGCAGGAAC CGCCGCCACA TGTTCATCAA CAACTCCGAT GCCGAGCTGC ATTGGTTGTG GTTCATCCAG CCCAACGGGC TGGAGGTGTT CTTCGAAGAG GTCGGCCGGC CGGTGATCCC CGGAGAGCCC GATCCGACGC CCTTCCCCCG CCCCGACAAC GTGCTGGAGA TCGAGCGCCG CACCGCCTTC GCACCGCAGC CCACCGACCA GCGCCGGCCG GAGTAA
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Protein sequence | MIPPKKPEWA ADPENNLGQV LVLGPQEGKN FYQPVPANGN ISVRIAPEFV DIQSPFSIGT QTLPPGGYVR EHSHPEHDEA LHFIRGTGKA VVDGVEYTIE PGVTIFVGRN RRHMFINNSD AELHWLWFIQ PNGLEVFFEE VGRPVIPGEP DPTPFPRPDN VLEIERRTAF APQPTDQRRP E
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