Gene Pden_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1043 
Symbol 
ID4578624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1020799 
End bp1021344 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content64% 
IMG OID639768365 
Productcupin 2 domain-containing protein 
Protein accessionYP_914850 
Protein GI119383794 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGC CGAAAAAACC CGAATGGGCC GCCGATCCCG AAAACAACCT GGGCCAGGTG 
CTGGTTCTCG GCCCGCAAGA GGGCAAGAAT TTCTACCAGC CCGTGCCCGC CAACGGCAAT
ATCTCGGTCC GCATCGCGCC GGAATTCGTC GATATCCAAA GCCCGTTCAG CATCGGCACC
CAAACCCTGC CGCCCGGCGG CTATGTGCGC GAGCATTCGC ACCCCGAACA TGACGAAGCA
CTTCATTTCA TCCGCGGCAC CGGCAAGGCC GTGGTGGACG GCGTCGAATA TACGATCGAG
CCGGGCGTGA CGATCTTTGT CGGCAGGAAC CGCCGCCACA TGTTCATCAA CAACTCCGAT
GCCGAGCTGC ATTGGTTGTG GTTCATCCAG CCCAACGGGC TGGAGGTGTT CTTCGAAGAG
GTCGGCCGGC CGGTGATCCC CGGAGAGCCC GATCCGACGC CCTTCCCCCG CCCCGACAAC
GTGCTGGAGA TCGAGCGCCG CACCGCCTTC GCACCGCAGC CCACCGACCA GCGCCGGCCG
GAGTAA
 
Protein sequence
MIPPKKPEWA ADPENNLGQV LVLGPQEGKN FYQPVPANGN ISVRIAPEFV DIQSPFSIGT 
QTLPPGGYVR EHSHPEHDEA LHFIRGTGKA VVDGVEYTIE PGVTIFVGRN RRHMFINNSD
AELHWLWFIQ PNGLEVFFEE VGRPVIPGEP DPTPFPRPDN VLEIERRTAF APQPTDQRRP
E