Gene Pden_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1033 
Symbol 
ID4579588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1012013 
End bp1012810 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content67% 
IMG OID639768355 
ProductABC transporter related 
Protein accessionYP_914840 
Protein GI119383784 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC ACACTCCTCC TCCCGTGCTT GAAGTGCGCA ATGTCTCGGT CCGTTTTGGC 
GGGGTCGCGG CGCTGACCGA TGTCTCCATG GCCGTCTGGC CGGGCGAGGT CGTGGCTCTG
GTCGGCGATA ACGGTGCCGG CAAGTCCACG CTGGTCAAGA CGATCTCGGG CATCCAGCAG
CCGGACGCGG GAGAGATCAT CGTCGCCGGT CGGACCCATG CGATGAAGGG ACCGCAGGAT
GCGGCCGCTG CGGGCATCCA GACCGTCTAT CAGGATCTTG CACTTTGCGA CAATCTGGAC
ACCGTGCAGA ACCTGTTCCT GGGGCGCGAG ATCTGCCTGC CCTGGTGGAA GGGTCGCCGC
ATGGACCGCG CCAGAATGGA AAAGCGTGCC CGCGAGGTGC TGTCCGACCT GGACGTCAAG
ATCCGCGATA CGCGGGTCCC CTCCAGCTCG CTTTCGGGCG GGCAGCGGCA ATCGGTGGCG
ATCTGCCGCT CGATCCTGGC CAACCCGCAG GTGGTTCTGC TGGACGAGCC GACCGCCGCG
CTTGGCGTGG CGCAGCGCAA GCAGGTGCTG GCGCTGATCG AGCGGCTCAA GGCGCAGGGC
AGGGCGGTCG TCATCATCTC GCATGACATC GGCGATGTGC AGCAGATCGC CGACCGCGTG
GTCGTGTTGC GCCTTGGCCG CAAGGTGGCC GAGGTGACGC GCGGCGGCTA CAGCCGCGAC
GAATTGATCG CCGCGATGAC CGGAGCGCTC GACGCGGCCG AACTTGCCGC CCTGCGCAAG
GAGCTCGCCC ATGGCTGA
 
Protein sequence
MATHTPPPVL EVRNVSVRFG GVAALTDVSM AVWPGEVVAL VGDNGAGKST LVKTISGIQQ 
PDAGEIIVAG RTHAMKGPQD AAAAGIQTVY QDLALCDNLD TVQNLFLGRE ICLPWWKGRR
MDRARMEKRA REVLSDLDVK IRDTRVPSSS LSGGQRQSVA ICRSILANPQ VVLLDEPTAA
LGVAQRKQVL ALIERLKAQG RAVVIISHDI GDVQQIADRV VVLRLGRKVA EVTRGGYSRD
ELIAAMTGAL DAAELAALRK ELAHG