| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1030 |
|---|
| Symbol | |
|---|
| ID | 4579585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1007692 |
|---|
| End bp | 1008927 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639768352 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_914837 |
|---|
| Protein GI | 119383781 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCATC CCGACAGCGC GACAGGAGGA GACATCATGC GCGACAGGTT CCAGATCCCG
CCCGACATCC GGCGGGCGCG GATAGCGACC ACGGCCGTGT TCTTTGTGAA TGGCATGGCT
CTGGCGCTGT TCTTTTCAAA CATCGCGCTG CTCAAGGAAT TGATTGCGCT CAGCGATGCG
CGGCTGGGCA CCGCACTGGG CCTGCAGGGG CTGGGCACGG TGATCTTCGT CGTGATCGGC
AGTCTGGTGG CGACGCGGTT CGGAACCCGC GCCACCATGC TTTTTGGCGC GGTCATGCTG
GCGCTGGCGC TGCAGATGGT CGGCTTCGCC ACGCAATACA CCGGCTTTCT GCTGGCCATC
CTGGCGCTTG GCGCCTCCAA CAGTTTCATC GACGTGTCGA TGAATGCCCA TGCCTCGCTG
GTCGAGCGGC AATGGCGGGC CGAGATCATG CCCTCGTTTC ACGCCGCCTA TAATTTCGGC
GGCTTTGCCG GGGCGTCGCT CGCTGCACAG CTGATCCGGG CCAGCGGCGG GGCCTATTCC
TCGCTGACGG TGGGCGGTAT CGCGATGGTG GCGGTGCTGA TGCTTGGCTG GGTGATGCTG
GGCAATCTGA AGCCCGCGGC CGAAACGTCG CAGGGCGGCA ATCGCGCCAT CACCCGCCAT
ATCCTGCGCT CGCCGGCGAT CGTGATCTTG GGCGTCTTCG TCGCATTGGC GTTGTTCGTC
GAGAATGCAA TGAACGGCTG GAGCGGCGTC TATCTGTGCG ACGTGGTCAA GGCCGATCCT
GCGGCGGCTG CCAATGCCTT TGCCGCCTTC CAGCTTGCTC TGGCCATCGG CCGGCTGCTG
GGCAGCGCTG CCATCCGCCG TTTCGGAGCC GAGTGCGTGG TCGTGTCGGG TGGTCTGCTG
GCTGGGGCGG GCGTGCTGCT GGCAGTGACG GTAGCGTCGC ACTGGGCCGC GTTGATCGGC
TTTGCCGCCA TAGGGTTCGG CTTGGCGAAC TGCACGCCGA TGTTCTTTAC CCGGGCTGCG
GCCGCGATCC CCCCGGCGCC GGCGCTTGGC ATCGCGCTGG TCAACACGAT TGGTTATATC
GGCTATATCT GCGGCCCGCT GGCCTTGGGG CTGGTCTCGG AATATCAGGG CCTGAAAACC
GCCTTCCTGC TGATCCTGGG TGCCATGCTG ATCATCGCAC TGGGATGCCG CCTGGTTACG
GCACTGAAAT CCTCGGCGCA GATTGCGGTG CCATAG
|
|---|
| Protein sequence | MLHPDSATGG DIMRDRFQIP PDIRRARIAT TAVFFVNGMA LALFFSNIAL LKELIALSDA
RLGTALGLQG LGTVIFVVIG SLVATRFGTR ATMLFGAVML ALALQMVGFA TQYTGFLLAI
LALGASNSFI DVSMNAHASL VERQWRAEIM PSFHAAYNFG GFAGASLAAQ LIRASGGAYS
SLTVGGIAMV AVLMLGWVML GNLKPAAETS QGGNRAITRH ILRSPAIVIL GVFVALALFV
ENAMNGWSGV YLCDVVKADP AAAANAFAAF QLALAIGRLL GSAAIRRFGA ECVVVSGGLL
AGAGVLLAVT VASHWAALIG FAAIGFGLAN CTPMFFTRAA AAIPPAPALG IALVNTIGYI
GYICGPLALG LVSEYQGLKT AFLLILGAML IIALGCRLVT ALKSSAQIAV P
|
|---|
| |