| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1026 |
|---|
| Symbol | |
|---|
| ID | 4579581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1005295 |
|---|
| End bp | 1005960 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639768348 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_914833 |
|---|
| Protein GI | 119383777 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACA ACTTTCAGTT CGGCATCGTC CTTGACGCTT TGCCCGATCT GATGCGAGGG
GCTGCGCTGA GCCTGTCGAT TGCCATCGTT ACGATGGCGG TCGGCATCGT CTTGGCAATG
CCCCTTGCCG TCGGATCATG GAACGGCAAG GGGCTGGTCG CTTGCCTGTC GCGATCCTGG
ATCGAGCTTG CGCGGAACAC GCCTTGTCTC GCCCAGATCT ATTTTTTCTT CTACGGGCTT
GGTGCCTTCG GCATCTTCCT TTCGCCTTGG CTCGCTGTCG GCATCGCACT GTGCTTCAAC
AACGCGGGTT ATCTCGCCGA GATCTTTCGC GGCGGCCTGA ATGGCGTGAA CGCGAACCAG
ATGAAGGGCG CTCGCTCGCT GGGTCTCGGT CCCGTTGGTG CCTATCGCTA CATCGTCTTT
CCGCAGGTTT TCCGCAATAC GTTCAGTTCG ATCGGCAACC AGTTCATCTG GGCGCTTCTG
AATACTTCGC TGGGTGCGTT GATCGGACTT TACGATCTCA GCGGCGTTGC GATGGATTAC
CAGTCCCGGA CCTTCAAGAC CTTCGAGTTC TTCCTGGCCA TTGCCGTAAT CTACTTCATC
CTGGCCAAAC TGGTGCTGTT TCTGGCCAAC CGTTTCAAGC CTGGAGGCGC ACGCCATGCC
GCCTGA
|
|---|
| Protein sequence | MSYNFQFGIV LDALPDLMRG AALSLSIAIV TMAVGIVLAM PLAVGSWNGK GLVACLSRSW
IELARNTPCL AQIYFFFYGL GAFGIFLSPW LAVGIALCFN NAGYLAEIFR GGLNGVNANQ
MKGARSLGLG PVGAYRYIVF PQVFRNTFSS IGNQFIWALL NTSLGALIGL YDLSGVAMDY
QSRTFKTFEF FLAIAVIYFI LAKLVLFLAN RFKPGGARHA A
|
|---|
| |