Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1020 |
Symbol | |
ID | 4579769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 999184 |
End bp | 1000077 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639768342 |
Product | LysR family transcriptional regulator |
Protein accession | YP_914827 |
Protein GI | 119383771 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCA TCACCAACCT GCCCACCGAT CTGTTGCGCA CCTTCATCAC CGTGGTCGAA CTGGGCGGCC ATTCGCGGGC AGGCGCGGCG CTGGGACGCA GCCAGCCCGC GATCTCGCTG CAGATCCGGC GGCTGGAGGA ACTCGTGCGC GCGCCATTGC TGACGCAGGA GGGCCGCGCG ATCCTGCCCA CCCTGGCCGG CGAGGCGCTG CTGAGCTATG CGCGCGAGAT GGTGCGCATC AACGACGAGG CGGTGAGTTA CTTCCACCGC TCGGACAAGA CCGGGGTGCT GCGCATCGGC CTGCCGACCG ATTACGCGGT GGCTTTCCTG CAAGGCACGC TGACCCGCTA TATCCGCGGG CACGCCGAGG TCGAGCTGGA GGTGCATTGC GACCTCTCCC GCGAGTTGCA CCAGCATCTG CGCTCGGACG ACCTGGACAT CATCGTGGCG GTGATGCCGA CGGCGCGCAT GCCCTACCTG TCGCGCATGT GGACCGAGCA GCCGATCTGG GCCGCGGCCG AAGACTTTCA ACTGCCCGCC CATGCACCGG TCCCGCTGGG GGCGCATCCC GAGGGCTGCG ACTATCGCGC CCGCATGATC CAGGCGCTGG ATGCGGTCGA GCGGCGCTGG CGCATCGTCT ATACCGGCCC CGGCATCTCG GGCTTGCAGA ACGCGGTCAG GAACGGGCTT TGCGTGACCG CGCTGACCCG TGCCACCATG CTGTCCGGCA TGCGCATGCT GACGGAAGCC GACGGCTTTC CGGCGCTGGA GCCGCTGCGG GTCGGGCTGT TCTACAAGCA TCCCCGCCTG TCGGCGGCGG GCCTGCAACT GGTCAGCGAC CTGGTGGCCG ACCTGGACAG GGTCGGCTCC GGCATCCATG CGGTTTCGGT GTGA
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Protein sequence | MAGITNLPTD LLRTFITVVE LGGHSRAGAA LGRSQPAISL QIRRLEELVR APLLTQEGRA ILPTLAGEAL LSYAREMVRI NDEAVSYFHR SDKTGVLRIG LPTDYAVAFL QGTLTRYIRG HAEVELEVHC DLSRELHQHL RSDDLDIIVA VMPTARMPYL SRMWTEQPIW AAAEDFQLPA HAPVPLGAHP EGCDYRARMI QALDAVERRW RIVYTGPGIS GLQNAVRNGL CVTALTRATM LSGMRMLTEA DGFPALEPLR VGLFYKHPRL SAAGLQLVSD LVADLDRVGS GIHAVSV
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