Gene Pden_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1011 
Symbol 
ID4579760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp988911 
End bp990215 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content65% 
IMG OID639768333 
Productmajor facilitator transporter 
Protein accessionYP_914818 
Protein GI119383762 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGGC TTACCCGATT CAGGACGACG GACCGCGTTC TGTTCGTCAT CTGCCTGATG 
TATCTGGTCA CCTATATCGA CCGGGTGAAC ATCAGCACCG CTGCCCCCGC CATGCAGGCC
GAACTGGGCC TGACGAATTT CGAGCTCGGG CTGGCGTTTT CCGCTTTCGC CTATCCCTAT
GCGCTGTTCC AGATTCTCGG CGGCCGCCTG GGCGACCGGC TGGGGCCGCA CAAGACGCTG
ATCATCTGCG GCACGGTCTG GTCGGCCGCG ACGGTGATGA TCGGCTTCGT CGAGGGCGCG
GTCTCGCTGA TCATCGCGCG TGTGCTGCTG GGCATGGGCG AAGGCTCGGC CTTCCCGACC
GCTACCCGGG CGCTGTCGAA CTGGATGCCG GCCGAGAAGC GCGGCTTCGC GCAGGGCATC
ACCCATGCCT TTGCGCGCTT CGGCAACGCG TTGACGCCGC CGCTGATCGC TTTCCTGGTC
ATCGCGCTGT CCTGGCGGCA TGCCTTCATC ATCGTCGGCC TGATCAGCTT CCTGTGGGTG
GCGCTGTGGT GGTGGTATTT CCGCGACGAT CCCCGCAGCC ACAAGGGCAT CACCCCCGAA
GAGCTGGAGA CCCTGCCCGA CCAGAAGATC GTGGGCGAGC GCAAGACCCT GCCCTGGGGC
CGGCTGCTCA AGCGCATGCT GCCGGTGACG ATCACCGATT TCTGCTATGG CTGGACGCTG
TGGCTGTTCC TGAACTGGAT CCCGTCCTAT TTCCTGCACC AGCACGAGCT GGACCTGAAG
AAATCCGCCA TCTTCGCGGC CGGCGTCTTC TTGGCCGGGG TAGTGGGCGA CCTGGCGGGC
GGCTGGCTCA GCGACGGCAT CCTGCGCCGC ACCGGCAATG TCGCCCTGGC GCGGATCAGC
GTCATCATCC TGGGTTTCCT CGGCGCATTC GCCTGCATGC TGCCGGTGAT GTTCTCGACC
GATCTGGTGA CGGTGGCGAT CAGCCTCAGC GCGGCCTTCT TCTTCGCCGA GCTGATCGTG
GCGCCGATCT GGGCCACGCC GATGGACATC GCACCGCAAT ATTCGGGCAC CGCCAGCGGC
TTCATGAACT TCGGCTTCGG ACTGGCCGGG ATGATCTCGC CCATCGTCTT CGGGCTGATC
ATCGACCTGA CCGGACGCTG GGATCTGCCC TTCGCGGCCT CGCTGGTCCT GCTGCTGCTG
GGCGCGGCCT GCGCGCTGCT GATCCGCCCC GACCGCCCCT TCCGCGACGA TGACGACGAG
GATCTGGACT GTGCCCCGCA ACTGGCCAGC GCGGTGTCGA AATGA
 
Protein sequence
MLRLTRFRTT DRVLFVICLM YLVTYIDRVN ISTAAPAMQA ELGLTNFELG LAFSAFAYPY 
ALFQILGGRL GDRLGPHKTL IICGTVWSAA TVMIGFVEGA VSLIIARVLL GMGEGSAFPT
ATRALSNWMP AEKRGFAQGI THAFARFGNA LTPPLIAFLV IALSWRHAFI IVGLISFLWV
ALWWWYFRDD PRSHKGITPE ELETLPDQKI VGERKTLPWG RLLKRMLPVT ITDFCYGWTL
WLFLNWIPSY FLHQHELDLK KSAIFAAGVF LAGVVGDLAG GWLSDGILRR TGNVALARIS
VIILGFLGAF ACMLPVMFST DLVTVAISLS AAFFFAELIV APIWATPMDI APQYSGTASG
FMNFGFGLAG MISPIVFGLI IDLTGRWDLP FAASLVLLLL GAACALLIRP DRPFRDDDDE
DLDCAPQLAS AVSK