| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1006 |
|---|
| Symbol | |
|---|
| ID | 4579755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 983811 |
|---|
| End bp | 984200 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639768328 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_914813 |
|---|
| Protein GI | 119383757 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.733901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA AGCTGCATGC CATCTGTGAC AGCCAGGGCC GACCGCTCGA CCTGTTCGTC
ACCGCAGGGC AGGTCAGCGA CTACATCGGG GCGCGGGCGT TGCTCAGCAG CCTCCCAAAG
GTCGATTGGC TGCTCGGGGA TCGCGGCTAT GACGCCGACT GGTTCCGGGA AGCCTTGCAG
GACAAGGGGA TACGAGCCTG CATCCCCGGT CGAAAGCAGC GCAAGACACC GGTCAAATAC
GACAAGCGCC GATACAAGCG GCGCAACCGC ATCGAGATCA TGTTTGGCAG GCTCAAGGAC
TGGCGGCGCG TGGCAACCCG ATACGACAGA TGCCCGAAGG TCTTCCTCTC GGCCATCGCG
CTCGCGGCAA CCGTCATTTA TTGGTTATGA
|
|---|
| Protein sequence | MNTKLHAICD SQGRPLDLFV TAGQVSDYIG ARALLSSLPK VDWLLGDRGY DADWFREALQ
DKGIRACIPG RKQRKTPVKY DKRRYKRRNR IEIMFGRLKD WRRVATRYDR CPKVFLSAIA
LAATVIYWL
|
|---|
| |