| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0983 |
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| Symbol | |
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| ID | 4579557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 962933 |
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| End bp | 964771 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768305 |
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| Product | P4 family phage/plasmid primase |
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| Protein accession | YP_914790 |
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| Protein GI | 119383734 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3378] Predicted ATPase |
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| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA GGAGCGATGA CGACGCGCTC GGGCAGGTCC GGGCCGTGAT GAGCAATGCC
GAGGAGGTCG ATCTGCCCGA GGGGATGGAG CCGGAGGCCT CTGCCGGTGA TGGCGATAGC
CAATCCCCTG GAACCCCTTC CGAGGGCCAG GCCGACGATC CGTTTTCGGA CTGCGCGCAG
TATCCGCTCA ACGACCATGG CAACGGCCAG CGCTATGCCC GCCATTACCG GGATGAACTG
ATCTATGTGC CCCGCTATGG CTGGCACGTC TGGACCGGCC AGCGATGGCA GAAAGACGAG
GACGGCATCG AGGTTCGCCG CCGTGCCCAG ATGCTGGGCG AGTTGATTTC GCGGGAAATC
CCGCATCTTC GGCTCGAGGA CTGGCAGATG CAGATCCTCG AGGACGGCGT GCAGCTGCGG
CGGCGCGAGC GTGAACTCGG CCGCATCGTA AGCGCCGGAG GCGAGGAGGC GGAGGCCGCC
CAGCAGGAGC TGGATAGCAT GGCGCCCAAG CTTGCCCGCC TCTCGGGTGT CGAGAAGGTG
CTGCTTTCGG TCCGCAAGGA TCATCACGGC TGGGCGAAGA CCTCGGGCAA TACGACCCGG
ATCGACGCCT CGATCAAGGA GGCCGGCGTC GGCCTGGCCG TGTCGTTCGA GCGGCTGAAC
GCCGCCCCGC TCGATGTCTG TTGCGAGAAT GGGGTCATGC GATTCTCGGT CATTCCGGGC
GATCCGGAAA GCGGAATGAG CCCCATGGCC GACATGCAGT TCGTGCCGCA TGCCCGGGAT
CAGCTGATCA CCAAGATGAT GCCGGTGCGA TACGACCCGG AGGCGAAGCG GCCGATCTTC
GACAGGTTCA TCACGCGCAT CCTGCCCGAT CCAGAGGTCA GGCGCTTCGT GCAGCGCTGG
TTCGCCCTGA ATACCACGGC GCTGACCGGC GAGCAGAAGC TGGTCTTCTT CTACGGGCTC
GGCGCCAACG GCAAGTCCGT GCTGGTAGAC CTGATCGCCC GCATGTTCGG CGACTATGCC
GCAACGGCGC GGATCGAGAC CCTGACCGGT TCGACCAAGA AGGACGGATC GGCCGCTACC
CCGGACCTCG TGCCGCTCAT GCTCGCCCGC ATGGTGCGCA CGTCCGAACC CGAGGAGGGC
GAGAAGCTGC GCGAAGGGCT GATCAAGCAG CTGACCGGCG GCGAGCCGAT CAACGTGCGG
CCGAACTTCG GCGAGCAGAT CGAGGTCACG CCCAAGTTCA AGATCACCAT CCAGGGCAAC
TATCGCCCCG AGGTGCGCGG CCGGGATGAC GGGATCTGGC GCAGGCTGCT GATCGTGCCG
TTCGACGTGA CCATTCCGCC GAAGGAGCGG GACCCGGACC TGGGTGCCAA GCTCTGGGAA
GAGCGATCCG GCATCCTCAA CTGGCTGATC GAGGGCCTGA TAGACTACCT CGAGGGCGGG
CTGCAGGAGC CGCCGGCCGT TCTAAGTGCC ACCAACGAGT ATCGCGAGGA GAGCGACCCG
CTCGGTTTCT TCCTGGAGAG CTGTTGCGAC GTCTCCGGGC AACCAGAGGA CAGCGAGACC
GTCAAGGACC TGGTTCAGGC GTTCCAGTTC TGGCAGGACG AGCAGGGCGG CGCCGTGTGG
CAGCCCGGCA CCGTCCAGCG CCAGCTCAAG GACAAGATGC GCCGCTGGGT CAGTCCGAGC
ACCGGCAAGA AGTTCGCGGA ACGCAAGTCG AATGGCATCA TGCGCTATGA CGGCATCCGC
TTTTCGATTG AGTTCGGACA CCGCTTCAGG ACCGCGCCGC GTGACGCAAA TGGCCGCCCC
ATCGCCGGCC GCACCGGAGG CCAAGATGGC AGCCTCTGA
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| Protein sequence | MTDRSDDDAL GQVRAVMSNA EEVDLPEGME PEASAGDGDS QSPGTPSEGQ ADDPFSDCAQ
YPLNDHGNGQ RYARHYRDEL IYVPRYGWHV WTGQRWQKDE DGIEVRRRAQ MLGELISREI
PHLRLEDWQM QILEDGVQLR RRERELGRIV SAGGEEAEAA QQELDSMAPK LARLSGVEKV
LLSVRKDHHG WAKTSGNTTR IDASIKEAGV GLAVSFERLN AAPLDVCCEN GVMRFSVIPG
DPESGMSPMA DMQFVPHARD QLITKMMPVR YDPEAKRPIF DRFITRILPD PEVRRFVQRW
FALNTTALTG EQKLVFFYGL GANGKSVLVD LIARMFGDYA ATARIETLTG STKKDGSAAT
PDLVPLMLAR MVRTSEPEEG EKLREGLIKQ LTGGEPINVR PNFGEQIEVT PKFKITIQGN
YRPEVRGRDD GIWRRLLIVP FDVTIPPKER DPDLGAKLWE ERSGILNWLI EGLIDYLEGG
LQEPPAVLSA TNEYREESDP LGFFLESCCD VSGQPEDSET VKDLVQAFQF WQDEQGGAVW
QPGTVQRQLK DKMRRWVSPS TGKKFAERKS NGIMRYDGIR FSIEFGHRFR TAPRDANGRP
IAGRTGGQDG SL
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