| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0958 |
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| Symbol | |
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| ID | 4579669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 944898 |
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| End bp | 947219 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639768279 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_914765 |
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| Protein GI | 119383709 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.685684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGCA AGGACAAAAA ACCGGAAGTC GAAGCCGGGG CCGGCGATGC GGCCAAACCG
CGCAAGGCTC GCGGGACTGG GGCAAAGGCC CGATCCGCGG CCAAGGTCGC GAAACAGGAC
CCGGCCCCCG CCGATTCGGA AGCGCCGGCG CGCGGCCGCC GGGCGAAGGC TGCCCCCGCT
GCCAAGGCCG CGCAGGAGCC CGTGACGCTG GCCAAGCCCA AGGCGGCCGC CGGATCCGGG
GCCGGCAAGC CTGCCGCCGA GCCGGTTGCC AAGTCCGGCG CCCGCAAGCC CGTGTCGCGT
GCGCGGGCGG CCAGCCGCAG CGATCCCCGC ACCGGCACGC GCCGCAAGCC CTCTGCCAAG
GCCGCCGCGA AGGCGCAGGC CGAAGCCGCA TCGCTGAGCG CGGTCGACGA GGCGCTGCGC
CCGCTTGGCG CCGTCGGGCC GGGTGCCGCG CCGCCCATGG CCGCGCCCGC TGCCGCGAGC
CCGACCCCCG CCGGGACCGA AAGACCCGCC GCCCCCGCTG CCGAGCCGTC CAGCGCCGCC
GCCTTCGCCG AAGCCGCCTT CGGCATCGGC AGCCGCCTGC CCGAGCAGCT GGCCCAGAAC
ATCGAACGTA TCGAATCGCT GACCCAGCGC CTGATCAGCG CGCTGGCGCA GCGCCGCCCA
CACAGCCCCG GCGTCGAACT GCCCGGTCCC GAACTGTTCG CCACCGCGAC CGGCGCCTGG
ATCAAGCTGC TGACCGAGCA GCCCGAGCGC GTGCTCAGCC AGCAGGTCAG CTATTGGGGC
GAGACGCTGC GCCATTTCGC CGAGGCCCAG GCCGCCCTTG CCCGCGGCAC GCTGAAGCCG
CCGCCCAGCG AGGGACTCCG GGACCGGCGC TTCTCGAACC CGCTCTGGGA GGCGCATCCG
TTCTTCAACT TCATCAAGCG GCAATACCAG ATCAACGCCC AGGCGCTGGA AGAGGCGGCC
AGCGCGCTCG ACCTGCCCGA GATGACCGAC CGGCGCCGGA TCGAATGGTT CACCCGCCAG
ATGATCGACA TGATGGCGCC GACGAATTTC CTGGCGACCA ATCCCGACGC GCTGGAAAAG
GCGCTGGAGA CCGAGGGCGA AAGCCTGGTC AAGGGCCTTG AGAACCTGGT GCGTGACGTC
GAGCAGAACA ATGGCGAGCT GATCGTCTCG CTGGCCGACC GCGACGCCTT CCGCGTGGGC
GAGAACATCG GCACCACCGA GGGCACGGTG GTGGCGCGCA CCAAGCTTTA CGAGCTGATC
CAGTACAAGC CCACCACCGC CCAGGTGCAC GAGATCCCGC TGGTAATCTT TCCGCCCTGG
ATCAACAAGT TCTACATCCT CGACCTCAAG CCGCAGAACA GCCTGATCAA ATGGATCGTC
GATCAGGGCT ATACGCTGTT CGTGGTGGCC TGGAAGAACC CCGATCCCAG CTATGGCGAT
ACCGGCATGG ACGATTACGT CACCGCCTAT CTGGAGGTGA TGGACCGGGT GCTGGACCTG
ACCGACCAGA AAAAGCTGAA CGTCGTCGGC TATTGCATCG CCGGGACGAC GCTGGCGCTG
ACGCTGTCGA TCCTCAAGCA GCGCGGCGAC GACCGGGTGA ATTCGGCCAC CTTCTTCACT
GCGCTGACCG ATTTCGCGGA TCAGGGCGAG TTCACCGCCT ATCTGCAAGA GGATTTCGTC
TCGGGCATCG AGGAGGAGGC GGCGCGGACC GGCGTGCTTG GCGCGCAGCT GATGACGCGC
ACCTTCAGCT TCCTGCGCGC CAACGACCTG GTCTGGGGGC CGGCGATTCG CAGCTATATG
CTGGGCGAGA TGCCGCCCGC GTTCGACCTG CTGTTCTGGA ACGGCGACGG CACCAACCTG
CCCGGGCGCA TGGCGGTGGA ATACCTGCGG GGCCTGTGCC AGCAGAACCG CTTCGTCAAG
GAGGGGTTCG ACCTGCTGGG CCACCGACTG CATGTCGGTG ACGTCACCGT GCCGCTTTGC
GCCATCGCCT GCGAGACGGA TCATATCGCG CCCTGGCGCG ACAGCTGGCG CGGCGTGGCG
CAGATGGGCT CGAAGGACAA GACCTTCATC CTGTCCGAAT CGGGCCATAT CGCCGGCATC
GTCAATCCGC CCAGCAAGAA GAAATACGGC CATTACACCT CGGATGCCGG TTTCGATCAG
GGCGAGCAGC ACTGGCTGGA CAAGGCCAGG CATCACGAGG GCAGCTGGTG GGGCCGCTGG
GGCGAGTGGC TGGCCCGCCG GGCGGGGAAC ATGGTCGAGG CCCGCGATCC GGGCGAGGGC
TTCGGCCCCG CGCCCGGGCT CTACGTTCAC GAGCGGGCAT AA
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| Protein sequence | MAGKDKKPEV EAGAGDAAKP RKARGTGAKA RSAAKVAKQD PAPADSEAPA RGRRAKAAPA
AKAAQEPVTL AKPKAAAGSG AGKPAAEPVA KSGARKPVSR ARAASRSDPR TGTRRKPSAK
AAAKAQAEAA SLSAVDEALR PLGAVGPGAA PPMAAPAAAS PTPAGTERPA APAAEPSSAA
AFAEAAFGIG SRLPEQLAQN IERIESLTQR LISALAQRRP HSPGVELPGP ELFATATGAW
IKLLTEQPER VLSQQVSYWG ETLRHFAEAQ AALARGTLKP PPSEGLRDRR FSNPLWEAHP
FFNFIKRQYQ INAQALEEAA SALDLPEMTD RRRIEWFTRQ MIDMMAPTNF LATNPDALEK
ALETEGESLV KGLENLVRDV EQNNGELIVS LADRDAFRVG ENIGTTEGTV VARTKLYELI
QYKPTTAQVH EIPLVIFPPW INKFYILDLK PQNSLIKWIV DQGYTLFVVA WKNPDPSYGD
TGMDDYVTAY LEVMDRVLDL TDQKKLNVVG YCIAGTTLAL TLSILKQRGD DRVNSATFFT
ALTDFADQGE FTAYLQEDFV SGIEEEAART GVLGAQLMTR TFSFLRANDL VWGPAIRSYM
LGEMPPAFDL LFWNGDGTNL PGRMAVEYLR GLCQQNRFVK EGFDLLGHRL HVGDVTVPLC
AIACETDHIA PWRDSWRGVA QMGSKDKTFI LSESGHIAGI VNPPSKKKYG HYTSDAGFDQ
GEQHWLDKAR HHEGSWWGRW GEWLARRAGN MVEARDPGEG FGPAPGLYVH ERA
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