| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0955 |
|---|
| Symbol | thrS |
|---|
| ID | 4579666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 940532 |
|---|
| End bp | 942478 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639768276 |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_914762 |
|---|
| Protein GI | 119383706 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.843203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.958295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGA TCTCCCTGAC CTTTCCCGAT GGCAATGCGC GCGACTATCC CGCAGGCGTG
ACCGCCGCCG AGGTCGCGGC CTCCATCGCC CCCAGCCTGG CGAAGAACGC CATCTCGGCC
AGCCTCGACG GGCAGCATAT CGACCTGCAA TGGCCGATCG CGGCCAGCGG CCGCATCGCC
ATCAACACCA TGAAGGACAG CGAGCCGGCG CTGGAGCTGA TCCGCCACGA CCTTGCCCAT
ATCATGGCCC GCGCCGTGCA GGAGCTGTGG CCGGACGTCA AGGTCACCAT CGGCCCGGTG
CGCGACCAGG GCTGGTTCTA CGACTTCGAC CGCGCCGAAC CCTTCACGCC CGAGGACCTG
GGCGCCATCG AGCAGCGCAT GAAGCAGATC ATCGCCGCCC GCGACCCGGT CCGCACCGAG
GTCTGGGACC GCGACCGCGC GCGCGCCCAT TACGAGGCGC AGGGCGAGCC CTTCAAGATC
GAGCTCCTCG ACCGCATCCC CGAGGGCGAG CCGATCCGCA TGTATTGGCA CGGCGACTGG
CAGGATCTCT GCCGCGGCCC GCATCTGCAG CATACCGGCC AGGTGCCGGC CGATGCCTTC
AAGCTGACCC ATGTCGCCGG CGCCTATTGG CTGGGCGACG CCTCGCGGCC GATGCTGCAA
CGCATCTACG GCGTGGCCTT CCGCAACCGC GACGACCTCA AGGCCCATCT CACCATGCTG
GAAGAGGCCG CCAAGCGCGA CCACCGCAAG CTGGGCCGTG AAATGGAGCT GTTCCACTTC
CAGGAAGAGG CGCCGGGCAT GGTGTTCTGG CACCCGAACG GCTGGTCGAT CTATCGCGAG
CTCGAGGCCT ATATGCGCCG CCGGCTGATC CGCGCCGATT ACAAGGAAAT CAAGACGCCC
CAGGTGGTGG ACCGCATCCT GTGGGAGAAA TCCGGCCATT GGGAAGCCTA TCGCGAGAAC
ATGTTCATCG TCGAGGTGGA CGAGGAAGGC GCCAAGGAAA AGCGTATCAA CGCGCTCAAG
CCGATGAACT GCCCCTGCCA TGTCCAGGTC TACAACCAGG GCCTGAAATC CTATCGCGAC
CTGCCGCTGC GGCTGGCGGA GTTCGGCTCC TGCCACCGCT ACGAGCCCTC GGGCTCGATG
CACGGGCTGA TGCGGGTGCG CGGCTTCGTC CAGGACGACG CGCATATCTT CTGCACCGAG
GACCAGATCG AGGCGGAATG CGCCGGCTTC ATCGGCCTGC TCTCCTCGGT CTACAAGGAT
CTCGGCTTCG AGAAATTCGA CATCAAGCTC TCGACCCGGC CGGATGTGCG CGTGGGCTCC
GACGAGATCT GGGACAAGGC CGAGGCGGCG CTGAAAGGCG CCATCGAGCA TCTGGACCTG
CCCTATGAGG TCAATCCCGG CGACGGCGCC TTCTACGGGC CGAAGCTGGA CTTCAAGCTG
ACCGACGCCA TCGGCCGCGA ATGGCAATGC GGCACCTTCC AGTGCGACTT CAACCTGCCG
CAGCGGCTCG AGGCGGAATA TGTCGGCGAG GACGGGGCCA AGCACATGCC GGTCATGCTG
CACCGCGCCG TGCTGGGCAG CTTCGAGCGC TTCATCGGCA TCCTGATCGA GAACTATTCG
GGCAAGCTGC CCTTGTGGCT GGCGCCGCGC CAGGTCGTGG TCGCCTCGAT CGTCTCGGGC
GCCGACGACT ACGTCCACGA GGTCGTGGCC GCGCTGCGCG CCGCCGGGCT GCGTGCCGAA
GCCGACACCC GCAACGAAAA GATCAACTAC AAGGTCCGCG AGCATTCGGT CGGCAAGGTG
CCGGTCATCA TGGCCGTGGG CCTGAAGGAG GTCGAGGAGC GCAGCGTCTC GATCCGCCGG
CTCGACCGCC AGGGCAGCGA AAGCCACGGC CTCGAATCGG CCATCGCCAC GCTGCGGGCC
GAGGCTACCC CGCCGGATCT GCGCTAA
|
|---|
| Protein sequence | MSQISLTFPD GNARDYPAGV TAAEVAASIA PSLAKNAISA SLDGQHIDLQ WPIAASGRIA
INTMKDSEPA LELIRHDLAH IMARAVQELW PDVKVTIGPV RDQGWFYDFD RAEPFTPEDL
GAIEQRMKQI IAARDPVRTE VWDRDRARAH YEAQGEPFKI ELLDRIPEGE PIRMYWHGDW
QDLCRGPHLQ HTGQVPADAF KLTHVAGAYW LGDASRPMLQ RIYGVAFRNR DDLKAHLTML
EEAAKRDHRK LGREMELFHF QEEAPGMVFW HPNGWSIYRE LEAYMRRRLI RADYKEIKTP
QVVDRILWEK SGHWEAYREN MFIVEVDEEG AKEKRINALK PMNCPCHVQV YNQGLKSYRD
LPLRLAEFGS CHRYEPSGSM HGLMRVRGFV QDDAHIFCTE DQIEAECAGF IGLLSSVYKD
LGFEKFDIKL STRPDVRVGS DEIWDKAEAA LKGAIEHLDL PYEVNPGDGA FYGPKLDFKL
TDAIGREWQC GTFQCDFNLP QRLEAEYVGE DGAKHMPVML HRAVLGSFER FIGILIENYS
GKLPLWLAPR QVVVASIVSG ADDYVHEVVA ALRAAGLRAE ADTRNEKINY KVREHSVGKV
PVIMAVGLKE VEERSVSIRR LDRQGSESHG LESAIATLRA EATPPDLR
|
|---|
| |