| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0943 |
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| Symbol | |
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| ID | 4579417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 923313 |
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| End bp | 926732 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639768264 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_914750 |
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| Protein GI | 119383694 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.613839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTG TCAACCCCAC CGTGCGTTCG GACGTGTTTT CCGCACAGGC GAAATTCGCC
GACGAGGCGG AGCTGCTCAG TGGGCTGGTC GCGCAGGCGG GGCTGGACGA CGCGCAGCGC
GCCGCGATCA CGCGCCGGGC CGCCGATCTG GTGCGCCGGA TCCGCGACGA GGCGAAGCCG
ACGATGATGG AGCATTTCCT GGCCGAATAC GGGCTGTCCA CGCGCGAGGG CGTGGCGCTG
ATGTGCCTGG CCGAGGCGAT GCTGCGCGTC CCCGACCGCA TGACCATCGA CGCGCTGATC
GAGGACAAGA TCGCGCCCTC GGACTGGGGC AAGCATCTGG GCGAGGCGTC CTCGTCGCTG
GTCAATGCCT CGACCTGGGC CCTGATGCTG ACCGGCAAGG TGCTGGACGA CGACCAGGCC
GGGATCGCCG GCACCCTGCG CCGCGCCGTG CGCCGGCTGG GCGAGCCGGT GATCCGCACC
GCCGTCGGCC GCGCGATGAA GGAGATGGGC CGCCAATTCG TGCTGGGCCA GACCATCGAG
GCGGCGCTGG AACGCGCGGC CAAACGCGAG GCGCAGGGCT TCACCTACAG CTACGACATG
CTGGGCGAGG CGGCGATGAC CGGCGCTGAT GCCGCGCGCT ACGACCGCGC CTATTCCGAC
GCCATCGCGG CGATCGCGAA AGCCTGCACC AGGGGCTCGG TCGAGGACAA TCCCGGCATC
TCGATCAAGC TGTCCGCCCT GCATCCGCGC TATGAGGTGG CGCAGGAATC CCGCGTCATG
ACCGAACTGG TGCCGGTGGT GCTGAAGCTG GCGCGCCAGG CCAAGGCCGC CGGCATGGGC
ATGAACATCG ACGCCGAGGA GCAGGACCGG CTGGTACTGT CGCTCAAGGT GATCGAGGCG
GTGCTGTCGG ACCCCTCGCT GGCCGGCTGG GACGGGTTCG GGGTGGTGGT GCAGGCCTAT
GGCAAGCGCG CCGGGCAGGT GATCGACTGG CTTTACGAAA CTGCCACGCG GCTGGACCGC
CGGATCATGG TGCGGCTGGT CAAGGGCGCC TATTGGGATA CCGAGATCAA GCGGGCGCAG
GTCGAGGGCT TTCCGGGCTT TCCGCTGTTC ACCAGCAAGG TCGCGACCGA TGTCAGCTAT
ATCGCCAATG CCCGCAAGCT GATCGGCTAC GCCGACCGCA TCTATCCGCA ATTCGCCACC
CATAACGCCC AGACCGTCGC GGCGATCCTG GAGATGGCGG GCGAGACCCG CTTCGAATTC
CAGCGCCTGC ACGGCATGGG CGAGCGGCTG CATGATATCG TGCTGCGCGA CCATAATGGC
CGCTGCCGCA TCTATGCGCC CGTCGGCGCG CATCGCGACC TGCTGGCCTA TCTGGTCCGG
CGGCTGCTGG AGAACGGCGC CAACAGCAGC TTCGTGCATC AGATCGTGGA CGAATCCGTC
TCGCCCGAGG AGGTCGCCCG CGATCCCTTC GCGGCGCTGG CCGAGGCGCG CCCGCCCTTG
GGCCTGATCA CGCCGGATGC GCTGTTCGGC GCCTCGCGCC GGAACTCGAC CGGGTTTGAT
CTGACCGACG AGGAGACTCT GGCCCGCATC TACACCGCCC GCGACGTGGC GATCCCGGAT
GCGATGCCGC TGACCGTTTC CGAGCCGACC GGCAAGATGC AGGACGTGCT GAACCCCGCG
ACGGGCGAGA AGATCGCCCG GGTGATGATG GTCGATGCGG ATACTGCCGC CCGCGCCATC
GCGGACGCGC GCATCTGGGA CGCATCGGCG GCCGAGCGTG CCGCGGTGCT GCGCCGTGCC
GCCGATCTTT ACGAAGATCA TTACGGCCCG ATCTTCGGCA TCCTCGGCCG CGAGGCCGGC
AAGTCGCTGG CCGATGCGGT GGCGGAACTG CGCGAGGCGG TGGACTTCCT GCGCTATTAC
GCCGCCGAGG GTGAGGCCAG CCCCGGCGCC CCGCGCGGCA TTGTCGGCGC AATCAGCCCG
TGGAACTTCC CGCTGGCGAT CTTTACCGGC CAGATCGCGG CGGCGCTGAT GGCCGGCAAT
GCGGTGATCG CCAAGCCGGC CGAGCCCACC CCCGTCATCG CCGCCTATGC CATCGGCCTG
CTGCATCAGG CGGGCGTTCC GAAAGCCGCG CTGCAACTGC TGCCGGGCGC TGGCCGCGTG
GTCGGCACGG CGCTGAGCTC GGATCCGCGC GTCTCGGGGC TGGTCTTTAC CGGCTCGACC
GGGACCGCGC AGACCATCGC GCGGACCATG GCTGCGAACC TGGCGCCCGG CACGCCGCTG
ATCGCCGAGA CCGGCGGGCT GAACGCGATG GTGGTCGATT CCACCGCGCT GCCGGAACAG
GCGGTGCGCG ACATCGTGAA CTCGGCCTTC CGCTCGGCCG GCCAGCGCTG CTCGGCGCTG
CGCTGCCTCT ATGTGCAAGA GGACGTGGCG CCGCATCTGG TCGAGATGAT CAAGGGCGCC
ATGGACGAGC TGCGCCTGGG CGACCCTTGG GATCTGACCA CCGATGTCGG CCCGGTGATC
GACCCCGGCG CGCAAAAGGA AATCGCCGAT TACATCGCCG CCAATGCAAA TCGCGTGCTG
CACAAGCTGG CGGCCCCCTC GCGCGGCTGG TTCATCCCGC CGACCATGCT GAAAGTGTCG
GGCATCGCGG ATCTGGAGCG CGAGATCTTC GGCCCGGTCC TGCATGTCGC CACCTTCCGC
GGCGACCAGC TGGACCAGAT GATCGCCGAC ATCAACGCCC GCGGCTTCGG CCTGACCTTC
GGGCTGCACA CCCGCATCGA CTCGCGCGTG CAGGAGGTTT CGGACGCCAT CCATGTCGGG
AATATCTACG TGAACCGCAA CCAGATCGGC GCGGTGGTGG GCAGCCAGCC CTTCGGCGGC
GAGGGCCTGT CGGGCACCGG CCCCAAGGCC GGCGGACCGC GCTATGTGCC GCGTTTCTTC
GCGCCCGCCG CGCCCTCGGC CGTGCCCGGC ACCTGGCAGG GCGAGGGCGA CGAGGCGCGG
CTGCGCGGCG CCCTGGCCGA TGCATCCCCG AAGAAGATCG ACGAGCGCCT GATGCCCGGC
CCCACGGGTG AACTGAACCG CCTGACCGCG CATGCCCGCC CGCCGGTGCT GTGCCTCGGC
CCCGGGGCCG AGGCCGTGGC GGCGCAGGTG GCGGCGGTTC AGGCACTTGG CGGTCAGGCG
GTGGGTGCGG ACGGCGCCCT GCCGCCCGAG GCGCTGACCC GTCTGCCGCA GCTTTCCACT
GTGCTCTGGT GGGGCGACGA GGCGCAGGGC CGCGCCCATG CCCAGGCGCT GGCGGCGCGC
GAGGGTGAAA TCGTGCAGCT GATCACCGCC ATGCCCGACC TCGCCCACAT CGCGCATGAG
CGCCACCTTT GCGTCGATAC CACCGCAGCG GGCGGCAACG CAGCATTGCT CGCAGGGTGA
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| Protein sequence | MNRVNPTVRS DVFSAQAKFA DEAELLSGLV AQAGLDDAQR AAITRRAADL VRRIRDEAKP
TMMEHFLAEY GLSTREGVAL MCLAEAMLRV PDRMTIDALI EDKIAPSDWG KHLGEASSSL
VNASTWALML TGKVLDDDQA GIAGTLRRAV RRLGEPVIRT AVGRAMKEMG RQFVLGQTIE
AALERAAKRE AQGFTYSYDM LGEAAMTGAD AARYDRAYSD AIAAIAKACT RGSVEDNPGI
SIKLSALHPR YEVAQESRVM TELVPVVLKL ARQAKAAGMG MNIDAEEQDR LVLSLKVIEA
VLSDPSLAGW DGFGVVVQAY GKRAGQVIDW LYETATRLDR RIMVRLVKGA YWDTEIKRAQ
VEGFPGFPLF TSKVATDVSY IANARKLIGY ADRIYPQFAT HNAQTVAAIL EMAGETRFEF
QRLHGMGERL HDIVLRDHNG RCRIYAPVGA HRDLLAYLVR RLLENGANSS FVHQIVDESV
SPEEVARDPF AALAEARPPL GLITPDALFG ASRRNSTGFD LTDEETLARI YTARDVAIPD
AMPLTVSEPT GKMQDVLNPA TGEKIARVMM VDADTAARAI ADARIWDASA AERAAVLRRA
ADLYEDHYGP IFGILGREAG KSLADAVAEL REAVDFLRYY AAEGEASPGA PRGIVGAISP
WNFPLAIFTG QIAAALMAGN AVIAKPAEPT PVIAAYAIGL LHQAGVPKAA LQLLPGAGRV
VGTALSSDPR VSGLVFTGST GTAQTIARTM AANLAPGTPL IAETGGLNAM VVDSTALPEQ
AVRDIVNSAF RSAGQRCSAL RCLYVQEDVA PHLVEMIKGA MDELRLGDPW DLTTDVGPVI
DPGAQKEIAD YIAANANRVL HKLAAPSRGW FIPPTMLKVS GIADLEREIF GPVLHVATFR
GDQLDQMIAD INARGFGLTF GLHTRIDSRV QEVSDAIHVG NIYVNRNQIG AVVGSQPFGG
EGLSGTGPKA GGPRYVPRFF APAAPSAVPG TWQGEGDEAR LRGALADASP KKIDERLMPG
PTGELNRLTA HARPPVLCLG PGAEAVAAQV AAVQALGGQA VGADGALPPE ALTRLPQLST
VLWWGDEAQG RAHAQALAAR EGEIVQLITA MPDLAHIAHE RHLCVDTTAA GGNAALLAG
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