Gene Pden_0932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0932 
Symbol 
ID4579406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp913215 
End bp913997 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID639768253 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_914739 
Protein GI119383683 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.733087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGA AATTCCTCAG CGGCAAGACG GCGGTGGTGA CGGGCTCCAA TTCGGGGATC 
GGGCTCGGGA TCGCGCATGA ACTGGCGCGC GCGGGCGCTG ATCTCGTGCT GAACAGCTTT
ACCGACATGC CCGAGGACCA CGCCCTTGCC GAAAGCCTTG CCGCCGAGCA TGGCGTCGAG
GTGCGCTATG TCCAGGCCGA CATGTCCAAG GGCGCCGACT GCCGCGCCCT GATCGAAAAG
GCCGGCGCCT GCGACATCCT GGTGAACAAT GCCGGCATCC AGCATGTCGC ACCGATCCCG
GATTTCCCGG GCGAGAAATG GGATGCGATC ATCGCCATCA ACCTGAGTTC CGCCTTTCAC
ACCACGGCGG CGGCGCTGCC CCTGATGCGC AAGGCAGGCT GGGGGCGGGT GATCAACATC
GCCTCGGCGC ACGGGCTGAC GGCCAGCGAA TACAAATCGG CCTATGTCGC GGCCAAGCAC
GGCATCGTCG GCCTGACCAA GGTGACGGCG CTGGAGACCG CGAAGGAGCC GATCACCTGC
AACGCCATCT GCCCCGGCTA TGTGCTGACC CCGATCGTGG AAAAGCAGAT CCCCGACCAG
ATGAAGACCC ACAACATGAG CCGCGAGGAC GTGATCGCCA AGGTCATGCT GCAGCGCCAG
CCCTCGGGGC AATTCGCCAC GGTCGAGCAG ATGGGCGGCA CGGCGGTCTT CCTGTGCTCG
CCGGCGGCGG AGCAGATCAC CGGCACGACC ATCTCGGTGG ACGGGGGGTG GACGGCGCTT
TAG
 
Protein sequence
MFEKFLSGKT AVVTGSNSGI GLGIAHELAR AGADLVLNSF TDMPEDHALA ESLAAEHGVE 
VRYVQADMSK GADCRALIEK AGACDILVNN AGIQHVAPIP DFPGEKWDAI IAINLSSAFH
TTAAALPLMR KAGWGRVINI ASAHGLTASE YKSAYVAAKH GIVGLTKVTA LETAKEPITC
NAICPGYVLT PIVEKQIPDQ MKTHNMSRED VIAKVMLQRQ PSGQFATVEQ MGGTAVFLCS
PAAEQITGTT ISVDGGWTAL