Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0932 |
Symbol | |
ID | 4579406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 913215 |
End bp | 913997 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639768253 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_914739 |
Protein GI | 119383683 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.733087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAGA AATTCCTCAG CGGCAAGACG GCGGTGGTGA CGGGCTCCAA TTCGGGGATC GGGCTCGGGA TCGCGCATGA ACTGGCGCGC GCGGGCGCTG ATCTCGTGCT GAACAGCTTT ACCGACATGC CCGAGGACCA CGCCCTTGCC GAAAGCCTTG CCGCCGAGCA TGGCGTCGAG GTGCGCTATG TCCAGGCCGA CATGTCCAAG GGCGCCGACT GCCGCGCCCT GATCGAAAAG GCCGGCGCCT GCGACATCCT GGTGAACAAT GCCGGCATCC AGCATGTCGC ACCGATCCCG GATTTCCCGG GCGAGAAATG GGATGCGATC ATCGCCATCA ACCTGAGTTC CGCCTTTCAC ACCACGGCGG CGGCGCTGCC CCTGATGCGC AAGGCAGGCT GGGGGCGGGT GATCAACATC GCCTCGGCGC ACGGGCTGAC GGCCAGCGAA TACAAATCGG CCTATGTCGC GGCCAAGCAC GGCATCGTCG GCCTGACCAA GGTGACGGCG CTGGAGACCG CGAAGGAGCC GATCACCTGC AACGCCATCT GCCCCGGCTA TGTGCTGACC CCGATCGTGG AAAAGCAGAT CCCCGACCAG ATGAAGACCC ACAACATGAG CCGCGAGGAC GTGATCGCCA AGGTCATGCT GCAGCGCCAG CCCTCGGGGC AATTCGCCAC GGTCGAGCAG ATGGGCGGCA CGGCGGTCTT CCTGTGCTCG CCGGCGGCGG AGCAGATCAC CGGCACGACC ATCTCGGTGG ACGGGGGGTG GACGGCGCTT TAG
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Protein sequence | MFEKFLSGKT AVVTGSNSGI GLGIAHELAR AGADLVLNSF TDMPEDHALA ESLAAEHGVE VRYVQADMSK GADCRALIEK AGACDILVNN AGIQHVAPIP DFPGEKWDAI IAINLSSAFH TTAAALPLMR KAGWGRVINI ASAHGLTASE YKSAYVAAKH GIVGLTKVTA LETAKEPITC NAICPGYVLT PIVEKQIPDQ MKTHNMSRED VIAKVMLQRQ PSGQFATVEQ MGGTAVFLCS PAAEQITGTT ISVDGGWTAL
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