| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0927 |
|---|
| Symbol | |
|---|
| ID | 4579401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 907993 |
|---|
| End bp | 909129 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639768248 |
|---|
| Product | putative deoxyguanosinetriphosphate triphosphohydrolase |
|---|
| Protein accession | YP_914734 |
|---|
| Protein GI | 119383678 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0232] dGTP triphosphohydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.99136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAC CCTATGCCTG CCAGCCCGAA GAAAGCCGCG GCCGCCGCTG GCCCGAGCGC
ATGTCCACCT TTCGCAGCCC CTGGCAGCGC GACCGCGACC GCATCATCCA TTCCAGCGCC
TTTCGCCGGC TCAAGCACAA GACCCAGGTC TTCGTCGAGC ATGAGGGGGA TTATTACCGC
ACCCGCCTGA CCCATACGAT CGAGGTGGCG CAGGTCGCCC GCACCATCGC CGGCGCGCTG
GGGCTGAACA CCGACCTGGC CGAGACGGTG GCGCTGGCGC ATGACCTGGG CCACCCGCCC
TTCGGCCATA CCGGGGAGGA TGCGTTGGCG GCGCTGATGG CGCCCTATGG CGGCTTCGAC
CACAATGCCC AGGCGCTGCG CATCGTCACC CGGCTGGAAC GGCATTACGC CGATTTCGAC
GGGCTGAACC TGACCTGGGA AAGCCTGGAA GGGATCGCCA AGCATAACGG GCCGGTGACG
GGCGATCTGC CCTATGCCTT GGCCGAGGTG AATGCGGAAT GGGATCTGGA GCTGCATACC
AATGCCAGCG CCGAGGCGCA GGTCGCGGCC GTGGCCGACG ACGTGGCCTA TAACCATCAC
GACCTGCATG ACGGGCTGCG CGCGGGGCTG TTCACCGAGG CGGACCTGGC GGAACTGCCC
GTCGTCGGCG AGGCTCTTGC CCGCGTCGAT GCGCTGCACC CGGGGCTGGA GCCGATGCGA
CGCCGGCACG AGGCGCTGCG CCGGGTCTTT GGCGTCATGG TCGAGGATGT GATCGCAGTG
GCGCAGAACC GGCTGGCCAG CCTGCAGCCG CAAAACGTGC AGGAGATTCG CGACATGGAA
GGGCCGATCA TCCGCTTTTC CAAGCCGCTC TACCAGAACC TCAAGGCGAT CAAGCTGTTC
CTGTTCCAGC GCATGTATCG CGCGCCCTCG GTGGTGGTCG AGCGGCGGCG GGTGACCGAG
ATGCTGAACG GGCTGTTCCC GCTGTTCCTG GACGACCCCT CGAAGATGCC GCGGACCTGG
TTCCAGGCCG CCGAGGCCGC GGGGGACGAG ACCGGGCGCG CCCGGGTGGT GCTGGATTAC
GTCGCCGGCA TGACCGACCG CTTTGCCATC CAGGAAGCGC AGCGCCTGCT GGGCTGA
|
|---|
| Protein sequence | MTAPYACQPE ESRGRRWPER MSTFRSPWQR DRDRIIHSSA FRRLKHKTQV FVEHEGDYYR
TRLTHTIEVA QVARTIAGAL GLNTDLAETV ALAHDLGHPP FGHTGEDALA ALMAPYGGFD
HNAQALRIVT RLERHYADFD GLNLTWESLE GIAKHNGPVT GDLPYALAEV NAEWDLELHT
NASAEAQVAA VADDVAYNHH DLHDGLRAGL FTEADLAELP VVGEALARVD ALHPGLEPMR
RRHEALRRVF GVMVEDVIAV AQNRLASLQP QNVQEIRDME GPIIRFSKPL YQNLKAIKLF
LFQRMYRAPS VVVERRRVTE MLNGLFPLFL DDPSKMPRTW FQAAEAAGDE TGRARVVLDY
VAGMTDRFAI QEAQRLLG
|
|---|
| |