Gene Pden_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0893 
Symbol 
ID4578571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp876043 
End bp877065 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID639768213 
Productcytochrome-c peroxidase 
Protein accessionYP_914700 
Protein GI119383644 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.849776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.50285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA CCGAAGCCAT CGACGACAGC GCCCTGCGCG AGGAAGCCAA GGGGGTGTTC 
GAGGCGCTTC CCGAGAAGAT GACGGCGATC AAGCAGACCG AGGAAAACCC CGAGGGCATC
GCGCTGACCG CCGAAAAGAT CGAGCTGGGC AAGATGCTGT TCTTCGACCC GCGCATGTCC
AGTTCCGGCC TGATTTCATG CCAGACCTGC CACAACGTCG GCCTGGGCGG GGTGGACGGC
CTGCCGACTT CGATCGGGCA CGGCTGGCAG CGGGGGCCGC GCAACGCCCC CACCATGCTG
AACGCGATCT TCAACGCCGC GCAGTTCTGG GACGGGCGCG CGGGCGACCT GGCGGAACAG
GCGAAAGGTC CGGTCCAGGC CGGCGTCGAG ATGAGCAACA CCCCCGATCA GGTGGTCCAG
ACCATCAATT CGATGCCGGA ATATGTCGAC GCCTTCAAGG CCGCCTTCCC GGATGAGGCA
GAGCCGGTCA GCTTCGACAA CTTCGCCGTT GCGATCGAGC AGTTCGAGGC CACGCTGATC
ACGCCGAACA GCGCCTTCGA CCGCTTCCTG GCCGGCGACG ATGCGGCGAT GTCCGACCAG
CAGAAGCGCG GCCTGCAAGC CTTTATCGAG ACCGGCTGCA CCGCCTGCCA CTACGGCATC
AACCTGGGCG GGCAGGACTA TCACCCCTTC GGCCTGATCG CCAGGCCCGG CGCCGAGGTG
CTGCCCGCAG GCGACAAGGG CCGCTACGAG ATCAGCCAGA CCGCGGATGA CGAATACGTC
TTCCGGGCCG CGCCGCTGCG CAACGTGGCG CTGACCGCAC CCTATTTCCA TTCGGGCGTG
GTCTGGGATC TGGCGGAAGC GGTGCAGATC ATGTCCTCGG CCCAGATCGG CACCGAACTG
ACCGATCAGC AGGCCAACGA CATCACCGCC TTCCTGGGCG CATTGACGGG CGAGCAACCG
GTGATCGACC ACCCGATCCT GCCGGTGCGC ACCGACACGA CACCGCTGCC CACGCCGATG
TAA
 
Protein sequence
MAQTEAIDDS ALREEAKGVF EALPEKMTAI KQTEENPEGI ALTAEKIELG KMLFFDPRMS 
SSGLISCQTC HNVGLGGVDG LPTSIGHGWQ RGPRNAPTML NAIFNAAQFW DGRAGDLAEQ
AKGPVQAGVE MSNTPDQVVQ TINSMPEYVD AFKAAFPDEA EPVSFDNFAV AIEQFEATLI
TPNSAFDRFL AGDDAAMSDQ QKRGLQAFIE TGCTACHYGI NLGGQDYHPF GLIARPGAEV
LPAGDKGRYE ISQTADDEYV FRAAPLRNVA LTAPYFHSGV VWDLAEAVQI MSSAQIGTEL
TDQQANDITA FLGALTGEQP VIDHPILPVR TDTTPLPTPM