| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0891 |
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| Symbol | rpsF |
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| ID | 4578569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 874705 |
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| End bp | 875100 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639768211 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_914698 |
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| Protein GI | 119383642 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.194189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.483607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCTTT ACGAGCATGT GCTGATCGCT CGCCAGGACC TGTCGAACGC GCAGGCCGAA
GGGCTGATCG AACATTTCTC GACCGTGATC GCCGACAACG GCGGCAAGGT CGTGGACAAC
GAATACTGGG GCGTGCGCAC GCTCGCCTAC AAGATCAACA AGAACCGCAA GGGCCACTAC
GCCTACCTGC GTTCGGACGC CCCCTCGGCC GCCGTGCAGG AGATGGAGCG CCTTGCCCGC
CTGCATGACG ACGTCATGCG CGTGCTGACC GTCCGCGTGG ACGAGCACAA GGACGGCCCC
TCGGTCCAGA TGCAGAAGCG CGACGAGCGC GAGCGCGGTG ATCGTGGCGA CCGCGGCGAA
CGCCGCGAGC GTCGTGACCG CGACGACCGG AATTAA
|
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| Protein sequence | MPLYEHVLIA RQDLSNAQAE GLIEHFSTVI ADNGGKVVDN EYWGVRTLAY KINKNRKGHY
AYLRSDAPSA AVQEMERLAR LHDDVMRVLT VRVDEHKDGP SVQMQKRDER ERGDRGDRGE
RRERRDRDDR N
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