Gene Pden_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0881 
Symbol 
ID4579277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp867318 
End bp867836 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content70% 
IMG OID639768201 
Productputative phosphohistidine phosphatase, SixA 
Protein accessionYP_914688 
Protein GI119383632 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00451478 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAC TCGGACACTG CCGCCTGATC CTGACCCGTC ATGCCAAATC GTCCTGGGAC 
GATCCGGCGC AACCGGATCA CGACCGGCCG CTGAACGCGC GCGGCCGCCG CTCGGCCCGT
GAATTGGGCG ATTGGCTGGC CAGCCGCGGC TATGAGCCCG AGGAGGTGCT GTGCTCGACC
GCCGAGCGCA CGCGCGAGAC CTGGGCCGGC ATCGCCATGG CGCCGCTGGA GGTGCGGCCG
CATATCCGTT ACGAGCCGGG CCTTTACCAC GCCACGCCCG AGAAGATGCT GGAGATCCTG
CGCAGCGCCT CGGCGCCCAC GGTGATGATG ATCGGCCACA ATCCCGGCAT CGCGGAATTC
GCCGCCATGT TGCCGGCGCG GGCGCCGCTG GACCCGGATT TCCGTCGCTA TCCGACGGCG
GCGACCCTGG TGGTCGATTT CCAGATCGGC GCCTGGTCCG AACTGCGCCC GGCGCAGGGC
AGCGTGCTGG ATTTCGTGCG CATGGACGGG CGCGGCTAG
 
Protein sequence
MTPLGHCRLI LTRHAKSSWD DPAQPDHDRP LNARGRRSAR ELGDWLASRG YEPEEVLCST 
AERTRETWAG IAMAPLEVRP HIRYEPGLYH ATPEKMLEIL RSASAPTVMM IGHNPGIAEF
AAMLPARAPL DPDFRRYPTA ATLVVDFQIG AWSELRPAQG SVLDFVRMDG RG