Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0871 |
Symbol | |
ID | 4579267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 857878 |
End bp | 859314 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639768191 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_914678 |
Protein GI | 119383622 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCTGA ATAGCTTATC GGGCCGATTC GCGGTGATCA CGGGCATTTT CGTGCTCCTG GCCGAATTGC TGATCCTGCT GCCCTCGATC GCGAACTATC GGTTGGATTT CCTGGAATCG CGGCTGGAGC GGGCGCAGAT CGCCAGCCTT GCGCTGCTGG CGACGGACGA ATCACTGGCC GCGGACCTGG AATCGGAACT GCTGGAGAAT GCCGGCGTCT TCAACGTCGT CCTGCGGCGC AACGACGTGC GCCAGCTTGT GCTGTCCTCG CCCATTCCCG GGCCGATCGC GGCCACCTAC GATCTGCGCG ACCAGCCGTT CTGGACCTCG ATCCGCGACG GCATGGCGCA GTTGGCCGAT CCGCAGAACC GGGTGATCCG GGTGATCGGC GCGCCGGTGA ACCAGGCCGG CCAGCTGATC GAGATCACCA CCGACACCGA GCGGCTGCGC ACCGAGATGA TCGATTACGG CCTGCGGCTG TTGCTGATCT CGGCCGCCTT CTCGGTCCTG ACCGCGCTGC TTCTGAACCT GGCGGCGCAG CGGCTGCTGC TGGTGCCGAT CCGGCGCGTC ATCAGCCACA TGACCGCCTA TGCCAATGCG CCCGAGGACG CGCGCTCGAT CATCACCCCC AACGCGCGGC TGACCGAACT GAACGAGGCC GAGACGGCGC TGGCCGCCAT GCAGCGCACC GTCACCTCGG CGTTGAAGCA AAAGGACCGG CTGGCGCAGC TGGGCCAGGC CGTGGCTCGC ATCAGCCACG ACCTGCGCAA CATCCTGACC ACGGCGCAGA TCTTTGCCGA CCGGCTGGAG ACCAGCGCCG ACCCCGCCGT GCGCCGCGCC GCGCCCAAGC TGGTGAATTC GATCAGCCGC GCGGTGAACC TGTGCGAGAC GACGCTGGCC TTCGGCAAGG CCGAAGAGCC GGCGCCGGCC CTGTCGCGCT TCAACCTCTC GGCCTTGGTG ACCGAGGTGA CCGAGGGCGA GGCGCTGGCC TCCGACCGGC CGGACGGGGC CGAGCCCATC GAGTTCCTGA CCGACATCCC GCCCAGCCTG ATGATCCGCG CCGACCGCGA CCAGCTGTTC CGGGTGCTGT CGAACCTGGT GCGCAATGCG CGGCAGGCCA TCGAGGCCAC GCGCCGGCCC GGCACCATCG AGATCGGCGC CGGCGAGGAC GAGCAGGAAT GGTGGATCCG CATCGGCGAT ACCGGCCCCG GCCTGCCCCA AAAGGCGCGG GATTTCCTGT TCCAGCCCTT CTCGGGCGGC TCGCGCAAGG GCGGCACCGG GCTTGGCCTT GCCATCGCGG CGGACCTGGT GCGCAATCAC GGCGGCCGGC TGGAGCTTTT GCGCAGCGAC GAGGAAGGCA CGCAGTTCAT CCTGCACCTG CCGCGCGAAC TGGCCGGGCT TGCCGCGCAG GTAGAGGCTG CGGCAGGCCA GCGCTGA
|
Protein sequence | MPLNSLSGRF AVITGIFVLL AELLILLPSI ANYRLDFLES RLERAQIASL ALLATDESLA ADLESELLEN AGVFNVVLRR NDVRQLVLSS PIPGPIAATY DLRDQPFWTS IRDGMAQLAD PQNRVIRVIG APVNQAGQLI EITTDTERLR TEMIDYGLRL LLISAAFSVL TALLLNLAAQ RLLLVPIRRV ISHMTAYANA PEDARSIITP NARLTELNEA ETALAAMQRT VTSALKQKDR LAQLGQAVAR ISHDLRNILT TAQIFADRLE TSADPAVRRA APKLVNSISR AVNLCETTLA FGKAEEPAPA LSRFNLSALV TEVTEGEALA SDRPDGAEPI EFLTDIPPSL MIRADRDQLF RVLSNLVRNA RQAIEATRRP GTIEIGAGED EQEWWIRIGD TGPGLPQKAR DFLFQPFSGG SRKGGTGLGL AIAADLVRNH GGRLELLRSD EEGTQFILHL PRELAGLAAQ VEAAAGQR
|
| |