Gene Pden_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0871 
Symbol 
ID4579267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp857878 
End bp859314 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content69% 
IMG OID639768191 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_914678 
Protein GI119383622 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGA ATAGCTTATC GGGCCGATTC GCGGTGATCA CGGGCATTTT CGTGCTCCTG 
GCCGAATTGC TGATCCTGCT GCCCTCGATC GCGAACTATC GGTTGGATTT CCTGGAATCG
CGGCTGGAGC GGGCGCAGAT CGCCAGCCTT GCGCTGCTGG CGACGGACGA ATCACTGGCC
GCGGACCTGG AATCGGAACT GCTGGAGAAT GCCGGCGTCT TCAACGTCGT CCTGCGGCGC
AACGACGTGC GCCAGCTTGT GCTGTCCTCG CCCATTCCCG GGCCGATCGC GGCCACCTAC
GATCTGCGCG ACCAGCCGTT CTGGACCTCG ATCCGCGACG GCATGGCGCA GTTGGCCGAT
CCGCAGAACC GGGTGATCCG GGTGATCGGC GCGCCGGTGA ACCAGGCCGG CCAGCTGATC
GAGATCACCA CCGACACCGA GCGGCTGCGC ACCGAGATGA TCGATTACGG CCTGCGGCTG
TTGCTGATCT CGGCCGCCTT CTCGGTCCTG ACCGCGCTGC TTCTGAACCT GGCGGCGCAG
CGGCTGCTGC TGGTGCCGAT CCGGCGCGTC ATCAGCCACA TGACCGCCTA TGCCAATGCG
CCCGAGGACG CGCGCTCGAT CATCACCCCC AACGCGCGGC TGACCGAACT GAACGAGGCC
GAGACGGCGC TGGCCGCCAT GCAGCGCACC GTCACCTCGG CGTTGAAGCA AAAGGACCGG
CTGGCGCAGC TGGGCCAGGC CGTGGCTCGC ATCAGCCACG ACCTGCGCAA CATCCTGACC
ACGGCGCAGA TCTTTGCCGA CCGGCTGGAG ACCAGCGCCG ACCCCGCCGT GCGCCGCGCC
GCGCCCAAGC TGGTGAATTC GATCAGCCGC GCGGTGAACC TGTGCGAGAC GACGCTGGCC
TTCGGCAAGG CCGAAGAGCC GGCGCCGGCC CTGTCGCGCT TCAACCTCTC GGCCTTGGTG
ACCGAGGTGA CCGAGGGCGA GGCGCTGGCC TCCGACCGGC CGGACGGGGC CGAGCCCATC
GAGTTCCTGA CCGACATCCC GCCCAGCCTG ATGATCCGCG CCGACCGCGA CCAGCTGTTC
CGGGTGCTGT CGAACCTGGT GCGCAATGCG CGGCAGGCCA TCGAGGCCAC GCGCCGGCCC
GGCACCATCG AGATCGGCGC CGGCGAGGAC GAGCAGGAAT GGTGGATCCG CATCGGCGAT
ACCGGCCCCG GCCTGCCCCA AAAGGCGCGG GATTTCCTGT TCCAGCCCTT CTCGGGCGGC
TCGCGCAAGG GCGGCACCGG GCTTGGCCTT GCCATCGCGG CGGACCTGGT GCGCAATCAC
GGCGGCCGGC TGGAGCTTTT GCGCAGCGAC GAGGAAGGCA CGCAGTTCAT CCTGCACCTG
CCGCGCGAAC TGGCCGGGCT TGCCGCGCAG GTAGAGGCTG CGGCAGGCCA GCGCTGA
 
Protein sequence
MPLNSLSGRF AVITGIFVLL AELLILLPSI ANYRLDFLES RLERAQIASL ALLATDESLA 
ADLESELLEN AGVFNVVLRR NDVRQLVLSS PIPGPIAATY DLRDQPFWTS IRDGMAQLAD
PQNRVIRVIG APVNQAGQLI EITTDTERLR TEMIDYGLRL LLISAAFSVL TALLLNLAAQ
RLLLVPIRRV ISHMTAYANA PEDARSIITP NARLTELNEA ETALAAMQRT VTSALKQKDR
LAQLGQAVAR ISHDLRNILT TAQIFADRLE TSADPAVRRA APKLVNSISR AVNLCETTLA
FGKAEEPAPA LSRFNLSALV TEVTEGEALA SDRPDGAEPI EFLTDIPPSL MIRADRDQLF
RVLSNLVRNA RQAIEATRRP GTIEIGAGED EQEWWIRIGD TGPGLPQKAR DFLFQPFSGG
SRKGGTGLGL AIAADLVRNH GGRLELLRSD EEGTQFILHL PRELAGLAAQ VEAAAGQR