Gene Pden_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0830 
Symbol 
ID4579445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp807211 
End bp808092 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID639768149 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_914638 
Protein GI119383582 
COG category[R] General function prediction only 
COG ID[COG4132] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGC CGCCCCCGAA CTTGCGAGAC GGAATGAGAC AGATCGGCTG GAACTGGCTG 
GGCGTGGTGC CCTTTTTCGC CTTTGCGTTG CTGTTTCTGG TGTTGCCGAC GATGAACATC
GTCATCGGCG CATTCCAGAA CCCGCAGGGC GAGTTCACGC TGGCCAATCT GGCCGGGCTG
GCCTCGCCGC GGATCGTGTC GAGCTTTGCC ATCTCGATCA AGATCTCGCT GGCCTCGGCG
CTGCTTGGCT GCCTGATCGG CTTCGCCATG GCGGCGGCGG TGGTCATGGG CGGCGTGCCG
CGCTGGATCA AGGGGCCGCT GATGACGTTC TCGGGCGTCG CCTCGAACTT CGCCGGCGTG
CCGCTGGCCT TTGCCTTCAT CGCCACGCTG GGGCGGGTGG GGCTGGTGAC CATGCTGCTG
CGGCAATGGT TCGGCATCAA CATCTATGCC ATGGGCTTCA ACCTGCTGTC GTTCTGGGGC
CTGACGCTGA CCTATCTGTT CTTCCAGATC CCGCTGATGA TCCTGATCAT CACCCCGGCG
CTGGAGGGGC TCAAGCGCGA ATGGCGCGAG GCGGCCGAGG TGCTGGGCGC CTCGACCGGG
CAATATTGGC GCATGGTGGC GCTGCCGATC CTGTTCCCGT CGCTGCTGGG CACCTTTGCG
CTGTTGTTCG CCAACAGTTT CGGGGCGGTG GCGACGGCCT ATGCGCTGAC CGGATCGTCG
CTGTCCATCG TGCCGATCAT GCTGTTCGCG CAGATCCGGG GCGACGTGCT GCAAGACCCG
CACCTGGGCT ATGCCATGGC CTTCGGCATG ATCGTCGTCA CGGGCCTTGC CAACCTTGCC
TATGTCGTCA TGCGCGCCCG TGCCGAACGG TGGATGCGAT GA
 
Protein sequence
MAGPPPNLRD GMRQIGWNWL GVVPFFAFAL LFLVLPTMNI VIGAFQNPQG EFTLANLAGL 
ASPRIVSSFA ISIKISLASA LLGCLIGFAM AAAVVMGGVP RWIKGPLMTF SGVASNFAGV
PLAFAFIATL GRVGLVTMLL RQWFGINIYA MGFNLLSFWG LTLTYLFFQI PLMILIITPA
LEGLKREWRE AAEVLGASTG QYWRMVALPI LFPSLLGTFA LLFANSFGAV ATAYALTGSS
LSIVPIMLFA QIRGDVLQDP HLGYAMAFGM IVVTGLANLA YVVMRARAER WMR