Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0830 |
Symbol | |
ID | 4579445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 807211 |
End bp | 808092 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639768149 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_914638 |
Protein GI | 119383582 |
COG category | [R] General function prediction only |
COG ID | [COG4132] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGGC CGCCCCCGAA CTTGCGAGAC GGAATGAGAC AGATCGGCTG GAACTGGCTG GGCGTGGTGC CCTTTTTCGC CTTTGCGTTG CTGTTTCTGG TGTTGCCGAC GATGAACATC GTCATCGGCG CATTCCAGAA CCCGCAGGGC GAGTTCACGC TGGCCAATCT GGCCGGGCTG GCCTCGCCGC GGATCGTGTC GAGCTTTGCC ATCTCGATCA AGATCTCGCT GGCCTCGGCG CTGCTTGGCT GCCTGATCGG CTTCGCCATG GCGGCGGCGG TGGTCATGGG CGGCGTGCCG CGCTGGATCA AGGGGCCGCT GATGACGTTC TCGGGCGTCG CCTCGAACTT CGCCGGCGTG CCGCTGGCCT TTGCCTTCAT CGCCACGCTG GGGCGGGTGG GGCTGGTGAC CATGCTGCTG CGGCAATGGT TCGGCATCAA CATCTATGCC ATGGGCTTCA ACCTGCTGTC GTTCTGGGGC CTGACGCTGA CCTATCTGTT CTTCCAGATC CCGCTGATGA TCCTGATCAT CACCCCGGCG CTGGAGGGGC TCAAGCGCGA ATGGCGCGAG GCGGCCGAGG TGCTGGGCGC CTCGACCGGG CAATATTGGC GCATGGTGGC GCTGCCGATC CTGTTCCCGT CGCTGCTGGG CACCTTTGCG CTGTTGTTCG CCAACAGTTT CGGGGCGGTG GCGACGGCCT ATGCGCTGAC CGGATCGTCG CTGTCCATCG TGCCGATCAT GCTGTTCGCG CAGATCCGGG GCGACGTGCT GCAAGACCCG CACCTGGGCT ATGCCATGGC CTTCGGCATG ATCGTCGTCA CGGGCCTTGC CAACCTTGCC TATGTCGTCA TGCGCGCCCG TGCCGAACGG TGGATGCGAT GA
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Protein sequence | MAGPPPNLRD GMRQIGWNWL GVVPFFAFAL LFLVLPTMNI VIGAFQNPQG EFTLANLAGL ASPRIVSSFA ISIKISLASA LLGCLIGFAM AAAVVMGGVP RWIKGPLMTF SGVASNFAGV PLAFAFIATL GRVGLVTMLL RQWFGINIYA MGFNLLSFWG LTLTYLFFQI PLMILIITPA LEGLKREWRE AAEVLGASTG QYWRMVALPI LFPSLLGTFA LLFANSFGAV ATAYALTGSS LSIVPIMLFA QIRGDVLQDP HLGYAMAFGM IVVTGLANLA YVVMRARAER WMR
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