| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0827 |
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| Symbol | |
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| ID | 4579442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 802307 |
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| End bp | 804943 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639768146 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_914635 |
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| Protein GI | 119383579 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.133627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC AACCCACTCC GATGATGGCG CAGTATCTCG CGATCCGCGA GGCCAATCCC
GGCGCGCTGC TGTTCTATCG CATGGGCGAT TTCTACGAGA TGTTCTTCGA GGACGCGGTG
GCCGCCGCCG CCGCCCTCGA CATCGCGCTG ACGAAACGCG GCACCCATCT GGGCGAGCCG
ATCCCAATGT GCGGCGTGCC GGTCCATGCC GCCGAAAGCT ACCTGCTGAC GCTGATCCGC
AAGGGCTTCC GCGTCGCCAT CGCCGAGCAG ATGGAGGATC CGGCCGAGGC CAAGAAGCGC
GGCAGCAAAT CCGTCGTCGC CCGCGATGTG GTGCGGCTCG TCACCCCCGG CACGCTGACC
GAGGAATCGC TGCTGGAGGC GCGGCGGCAC AATTTCCTGG CCAGCTTTGC CAGTGTGCGC
GATGAATCGG CGCTGGCCTG GGTGGACATC TCGACCGGCG CCTTCCGCGT CATGCCCTGC
CCGCCGGCGC GGCTGGCCCC CGAACTCGCC CGCCACGCGC CACGCGAATT GCTGGCGGCC
GAGGGCGCGA ACCTCGATGA GATCGCCGCC GAGGCGGGGG CCGCGCTGAC GGAACTGCCC
GGCGGCAGCT TCGACAGCAG CGCGGCGACG CGCCGGCTGT GCGCGCTGTT TTCGGTCGAG
ACGCTGGACG GGTTCGGCCA GTTTTCCCGC GCCGAACTGG CCGCCATGGG TGCCATCGCC
GATTACCTGG AACTGACGCA AAAGGGCCGG ATGCCGCTGA TCCGCCCGCC GGTGCGCGAG
GCGCTTGGCG GCGCCATGCA GATCGACGCC GCGACACGCC GCAACCTGGA GCTGACGCAG
GCCCTGTCCG GCGGGCGCGA GGGCAGCCTG CTGGCCGCCA TCGACCGCAG CGTGACGGCG
GGCGGCGCGC GGCTGCTGGA ACGCCGCATC AGCGCCCCCT CGCGCGACCT GGACGAAATC
CACGCCCGGC AGGCGGCGGT GGCGCATCTG GTGGACGAGC CGCGCCTGAC CGCCGATCTG
CGCGAGGCGC TGTCGCGCGC GCCCGACATG GACCGTGCCC TCTCGCGACT GGCGCTGGAG
CGGGGCGGGC CGCGCGACCT GGCCGCAATC CGCGCCGGGC TGACGCAAGG CGCGGCCATC
GCCGCAATGC TGGGCAACGA CGAGATCGCC GTGCTGGCCG AGGCGGCGCA CGACCTGACC
GGCCACGACG CGCTGATCGA CCTGCTGGAC GAGGCGCTGG TGGCCGAACC GCCCTTGCTG
GCGCGCGACG GCGGCTTTGT CGCGCCGGGC TATGACGAGG ACCTGGACGA AACCCGCCGC
CTGCGCGACG AGGGCCGCGG CGTCATCGCC CGCATGCAAG CCGACTATAT CGCAGAGACC
GGCGTGCAGA GCCTGAAGAT CAAGCATAAC AACGTCCTGG GTTACTTCAT CGAGACGACT
TCGACCCATG CGGAACGGAT GCTGGCCCCG CCGCTGAACG AGCGGTTCAT CCACCGCCAG
ACCACGGCGA ACCAGATCCG CTTCACCACG GTCGAGCTGT CCGAACTGGA AACCCGCATC
CTCAACGCCC GCGACCGCGC GCTGGAGATC GAGCGCGAGA TCTTTGCCCG CCTGTCCCGC
GCCGTGCTGG ACCGGGCCGG CCCCGTCGGG CAGGCGGCCC GCGCGCTGGC CGAGATCGAC
CTGACCGCCG CTTTCGCCGA CCTCGCCTCG GGCGAGGGCT GGGTGCGCCC CGAGGTCGAT
GCCAGCCGCG CCTTCGTGAT CGAGGGCGGC CGGCACCCGG TCGTGGAGCG TGCGCTCAAG
CGCAAGGGCG AGGCTTTCGT CGCCAACGAC TGCGCGCTGA CCCAGGGCGA GACCCCGGCG
ATCTGGCTGC TGACCGGCCC GAACATGGCC GGAAAATCGA CCTTTCTGCG CCAGAATGCG
CTGATCGCCA TCCTCGCGCA GGCGGGCGGC TTCGTGCCCG CGCGCCGCGC CCATATCGGG
CTGGTCAGCC AGCTTTTCAG CCGCGTCGGC GCGGCGGACG ACCTGGCGCG CGGCCGCTCG
ACCTTCATGG TCGAGATGGT CGAGACGGCG GCGATCCTGA ACCAGGCCGA CGACCATGCG
CTGGTGATCC TGGACGAGAT CGGGCGCGGC ACCGCGACCT GGGACGGGCT CAGCATCGCC
TGGGCGGTGA TGGAGCATCT GCATGCCACG AACCGCTGCC GGGCGCTGTT CGCCACGCAT
TACCACGAGA TGACATCGCT GTCGGCGCGC CTGCCCGGCG TCGAGAACGC CACCGTCGCG
GTGCGCGAAT GGGAGGGCGA GGTGATCTTC CTGCACGAGG TCAGGAAGGG CGCCGCCGAC
CGCTCCTATG GCGTGCAGGT GGCGCGGCTG GCGGGGCTGC CGCCCTCGGT TGTGGACCGC
GCCCGCGATA TCCTGCACCA GCTGGAAAGC GGCGAGCGGC AGGGCACCGG CAAGCCCGCC
GCGCTGCTCG ACGACCTGCC GCTGTTCCGC GCCGCGCCGG CCCCCGCACC CGCGGGCAAG
GCGAAGCCCT CGGTGGTCGA GGACCGCCTG CGCAGCCTGA ACCCCGACAC GATCAGCGCC
CGCGAGGCGC TGGACCTGGT CTATGAACTC CGCGGCATGC TGGATGGCGA GCCGTGA
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| Protein sequence | MSDQPTPMMA QYLAIREANP GALLFYRMGD FYEMFFEDAV AAAAALDIAL TKRGTHLGEP
IPMCGVPVHA AESYLLTLIR KGFRVAIAEQ MEDPAEAKKR GSKSVVARDV VRLVTPGTLT
EESLLEARRH NFLASFASVR DESALAWVDI STGAFRVMPC PPARLAPELA RHAPRELLAA
EGANLDEIAA EAGAALTELP GGSFDSSAAT RRLCALFSVE TLDGFGQFSR AELAAMGAIA
DYLELTQKGR MPLIRPPVRE ALGGAMQIDA ATRRNLELTQ ALSGGREGSL LAAIDRSVTA
GGARLLERRI SAPSRDLDEI HARQAAVAHL VDEPRLTADL REALSRAPDM DRALSRLALE
RGGPRDLAAI RAGLTQGAAI AAMLGNDEIA VLAEAAHDLT GHDALIDLLD EALVAEPPLL
ARDGGFVAPG YDEDLDETRR LRDEGRGVIA RMQADYIAET GVQSLKIKHN NVLGYFIETT
STHAERMLAP PLNERFIHRQ TTANQIRFTT VELSELETRI LNARDRALEI EREIFARLSR
AVLDRAGPVG QAARALAEID LTAAFADLAS GEGWVRPEVD ASRAFVIEGG RHPVVERALK
RKGEAFVAND CALTQGETPA IWLLTGPNMA GKSTFLRQNA LIAILAQAGG FVPARRAHIG
LVSQLFSRVG AADDLARGRS TFMVEMVETA AILNQADDHA LVILDEIGRG TATWDGLSIA
WAVMEHLHAT NRCRALFATH YHEMTSLSAR LPGVENATVA VREWEGEVIF LHEVRKGAAD
RSYGVQVARL AGLPPSVVDR ARDILHQLES GERQGTGKPA ALLDDLPLFR AAPAPAPAGK
AKPSVVEDRL RSLNPDTISA REALDLVYEL RGMLDGEP
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