Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0825 |
Symbol | |
ID | 4580571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 800699 |
End bp | 801505 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639768144 |
Product | transglutaminase domain-containing protein |
Protein accession | YP_914633 |
Protein GI | 119383577 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.504706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGA AGATCACCCA CGAGACCAGC TATTGCTACG ATCCGCCGGC GCAGGGACTG GTGCAGAGCC TGCGGCTGAC GCCCTCGGTC CATGAGGGGC AGCGGGTCGC GGACTGGACG ATTTCGGTCA GCGGCGGCCA GCGCGGCGCC GCATTTCGCG ACGGTGCCGG CGACTGGATC GAGGGCTGGA GCGTGCGCGG CCCGGTGCAG GAGATCGTGG TCTCGATCGC TGGCCAGGTC GAGACCCGCG ACACCGCCGG CGTGCTGCGC GGCCACCGCG AGACGGTGAA TCCGCTGGTC TATCTGCGCC CGACGGCGGC GACCCGGATC GACGCGGCGT TGCGCGACCT TGCCCTTTCC GAACAGGGCG AGGACGGGCT GGACCTTGCG CACCGGCTGG CCGCGGCCGT CGCAAGGGCC ATCGCCTATG AGCCGGGCGT GACCGAGGCG CATACCACCG CCGCCGAGGC CCTGGCGCTG GGGCAGGGGG TCTGCCAGGA CCATGCCCAT GCGCTGATCG CCTGCGCCCG CGAACGCGGC CTGCCGGCGC GCTATGTCTC GGGCTATCTG CATTCCAATG CCGGGGGCGA GCCGCATGAC GCCGCCCATG CCTGGGCCGA GATCCATGTC GGCTCCCTCG GCTGGGTCGG CTTCGACGCC GCGAATGCCT GCTGCCCGGA CGACCGCTAT GTCCGGCTGG GCTCGGGGCT GGACGCGGAC GATGCGGCGC CGGTGCGCGG CACCACCTTC GGCTCGGGCG AGGAAAGCCT GGACGTGCGG GTGCAGGTCG AGGAGATGGA GCAGTAA
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Protein sequence | MRLKITHETS YCYDPPAQGL VQSLRLTPSV HEGQRVADWT ISVSGGQRGA AFRDGAGDWI EGWSVRGPVQ EIVVSIAGQV ETRDTAGVLR GHRETVNPLV YLRPTAATRI DAALRDLALS EQGEDGLDLA HRLAAAVARA IAYEPGVTEA HTTAAEALAL GQGVCQDHAH ALIACARERG LPARYVSGYL HSNAGGEPHD AAHAWAEIHV GSLGWVGFDA ANACCPDDRY VRLGSGLDAD DAAPVRGTTF GSGEESLDVR VQVEEMEQ
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