| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0822 |
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| Symbol | |
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| ID | 4580568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 795629 |
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| End bp | 798091 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639768141 |
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| Product | peptidase domain-containing protein |
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| Protein accession | YP_914630 |
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| Protein GI | 119383574 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCA CGGGCAGAAA CCTGACCTTT GCCGATGCCG CCGGCACGAC CCTGCACGAG
ACGGCCGCGG TCGCCCGCGC GGTCCGCACC GAGGGCGGCG ATGCGCCGGC GGGGCGCTCG
ACCGGCTATG CGATGGCGGT GGGGGACACG TTCAACGGCA CCCTGAGCGC GGGCGACAGG
GATTGGGTGC GCGTTGAGTT GCAACCGGGC AGCTATGTCA TCACGCTGGA TTCGCGCGGC
GCGGCCGGCG TCTACGATCC GTATTTGCGG GTCATGGACG ACGATGGCGT GCAGGTCGCC
CAGAACGACG ACGGCGACGG GCTGAACTCG CGCCTGGTGC TGAACGTGGC CCAGCCCGGC
ACCTATTACT TGGAGGCGGG CAGCTATGCC GGGCTTTACT CGGGCGCCTA CAGCCTGAAT
CTGGCGGCGA CGGGGCCGAC GCACCACTTC ACCATGGCCG AGATCGCCCT GCAACTGACC
GACGGCTACT GGGAGGCGAC CGGGCGGTCG CGCCGCGCCT TCGATGTCGG GCAGGGCGAT
GTGCTGAACG TGGACCTGTC GGGGCTGACG CAGGAGGGGC GGCAATTGGC CGGCATGGCG
CTGTCGGCCT GGGCGCAGGT GACGGGCATC GTCTTCAACC GCAATCCCGG GACGAACGCG
ACCATCCACA TCACCTTCGA CGACAGCGAC TGGGGGGCTT GGTCCTCGTC GATGACCAGC
GGCGACCGCA TCGTCAGCTC GCATGTGAAT ATCGGGCTGG ACTGGCTGAT CAGCTATGGC
ACGGGCTACA ACAGCTACAG CTATCAGACC TATATCCACG AGATCGGCCA TGCCCTGGGG
CTGGGTCATG CGGGGAACTA CAACGGCAGC GCCGTCCTGG GGGTGAACAA CCACTATCTG
AACGACAGCT GGCAGGCATC GGTGATGTCC TATTTCGACC AGGCGGAGAA TGTCTGGGTC
GATGCCAGCT TTGCCTATAT CGCCTCGCCC ATGACCGCCG ACATCCTGGC GATCCAGCGG
CTTTACGGTC CGACCGCGAT CCGCACCGGC AACAACACCT ATGGCGAAAC CACCAATGCC
GGGCCAAGCT ATGCCACCAT CGCGGCGCTG CTGCGCAATG CGGATACGCG GGACGACATC
GCCTTTACCA TCTTCGACCA GGGCGGCGTG GACATGCTGG ACCTGGGCAC CGACACGCGT
GGCCAGCGCA TTTCGCTGGT GGCGGGGACG TCGTCCAACG CCTATGGGCT GGTGGGCAAT
ATCTCGATCA TGCCCGGCAC GCTGATCGAG AACGCGCAGG CCGGCCGCGG CAACGATCTG
GTCATCGGCA ACTGGGCCGA CAATATCCTG CGCGGCGGCG CCGGCAACGA CACGCTTCGT
GGTGCGGCGG GCAATGACAC GCTGAACGGC CAGGGCGGCG CCGACCGACT TGTGGGTGGT
GTGGGCGACG ACGTCTATGT CACCGATGGC CGGGACCAGA TCGTCGAGGC GGCGGGGCAG
GGCATCGATA CGGTGCGTTC TACCGTCACC CTGCAACTGG GTGCCAATCT GGAGAATCTG
GTGCTGATCT CGAACGCGGC GCAGGACGGC GGCGGCAATG CGCTGGCCAA CCGGCTGACC
GGCAATGCCC ATGCCAACCG GCTGGAGGGC TTTTCCGGCA ACGACACGCT GCTGGGCGGT
CAGGGCAACG ACACGCTGTA TGGCGGCAAC GGCTGGGACG TGTTGGGCGG CGGCGCCGGG
GCCGACCTGC TGATCGGCGG CAACGGCAAC GACATCCTGC GCGGCTGGAC CGGCAACGAC
ACATTGCGCG GAGGGGCCGG CAATGACACG CTGAACGGCC AGGGCGGTGC CGACCGGCTT
GAGGGCGGCG CGGGCGACGA CGTCTATGTC ACCGATGGCC GGGACCAGAT CGTCGAGGCG
GCGGGGCAGG GCATCGATAC CGTGCGTTCT ACCGTCACCC TGCGGCTGGG CGCCAATCTG
GAGAACCTGG TGCTGATCTC GAACGCGGCG CAGGACGGCA GCGGCAATGG GCTGGCCAAC
CGGCTGACCG GCAATGCCCA TGCCAACCGG CTGGAGGGCT TTTTCGGCAA CGACACGCTG
CTGGGCCGTC AGGGCAACGA TCTGCTGTTT GGCGGCCAGG GCGACGACTG GCTGGAGGGT
GGCGCCGGTG CCGACCTGCT GGTCGGCGGC CAGGGCGACG ATACCATGCT GGGCGGGGCC
GGGGCCGATC ATTTCGTCTT TCAGGGCGGC CGGGACGTCG TGGGCGATTT TCAGGACGAT
CTGGATACGC TTCGCATCGA CGACGCGCTT TGGGGCGGCG GCCCGCGCAG CGTGGCGCAG
GTCCTGCAAC TCGCCCATGT TGCGGGCGGC AATACCGTCT TCGATTTCGG CAACGGCAAT
GTGCTTACGC TGAACGGGTT TGCCAATATC GCCGCGTTGC AGGACGACCT GATCATCGTC
TGA
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| Protein sequence | MTLTGRNLTF ADAAGTTLHE TAAVARAVRT EGGDAPAGRS TGYAMAVGDT FNGTLSAGDR
DWVRVELQPG SYVITLDSRG AAGVYDPYLR VMDDDGVQVA QNDDGDGLNS RLVLNVAQPG
TYYLEAGSYA GLYSGAYSLN LAATGPTHHF TMAEIALQLT DGYWEATGRS RRAFDVGQGD
VLNVDLSGLT QEGRQLAGMA LSAWAQVTGI VFNRNPGTNA TIHITFDDSD WGAWSSSMTS
GDRIVSSHVN IGLDWLISYG TGYNSYSYQT YIHEIGHALG LGHAGNYNGS AVLGVNNHYL
NDSWQASVMS YFDQAENVWV DASFAYIASP MTADILAIQR LYGPTAIRTG NNTYGETTNA
GPSYATIAAL LRNADTRDDI AFTIFDQGGV DMLDLGTDTR GQRISLVAGT SSNAYGLVGN
ISIMPGTLIE NAQAGRGNDL VIGNWADNIL RGGAGNDTLR GAAGNDTLNG QGGADRLVGG
VGDDVYVTDG RDQIVEAAGQ GIDTVRSTVT LQLGANLENL VLISNAAQDG GGNALANRLT
GNAHANRLEG FSGNDTLLGG QGNDTLYGGN GWDVLGGGAG ADLLIGGNGN DILRGWTGND
TLRGGAGNDT LNGQGGADRL EGGAGDDVYV TDGRDQIVEA AGQGIDTVRS TVTLRLGANL
ENLVLISNAA QDGSGNGLAN RLTGNAHANR LEGFFGNDTL LGRQGNDLLF GGQGDDWLEG
GAGADLLVGG QGDDTMLGGA GADHFVFQGG RDVVGDFQDD LDTLRIDDAL WGGGPRSVAQ
VLQLAHVAGG NTVFDFGNGN VLTLNGFANI AALQDDLIIV
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