| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0813 |
|---|
| Symbol | |
|---|
| ID | 4580559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 787437 |
|---|
| End bp | 788591 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639768132 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_914621 |
|---|
| Protein GI | 119383565 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type
[TIGR01366] phosphoserine aminotransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.120229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGA CTGCTCCGGC CGCGCGGCCG GCCAATCCGC GCTTTTCTTC GGGCCCCTGC
GCCAAGATCC CCAATTTCTC GCTGGACATG CTTGCCGACG CGCCGCTGGG CCGCTCGCAT
CGTGCCGCCA TCGGCAAGGC CAAGCTGGCC GAGGCCATCG ACCTGACCCG TGAAGTCCTG
GGCGTGCCGG CGGATTACCG CATCGGCATC GTTCCCGCCT CGGATACCGG CGCCGTCGAG
ATGGCGCTGT GGTCGCTTCT GGGTGCGCGC AAGGTCGAGA TGCTGGCCTG GGAAAGCTTT
GGCGAGGGCT GGGTCACCGA CGTCGTCAAG CAGCTCAAGC TGGATGCGGT GGTGCGCAAG
GCCGATTACG GCAAGATCGT GGATTTCGCC CAGGTCGATT TCGACAACGA CGTGGTCTTT
ACCTGGAACG GCACTACCTC GGGTGTGCGC GTGCCGAATG GGGACGCGAT CCCTGCGAAC
CGGGCCGGGC TGACCATCTG CGACGCCACC TCGGCCGCCT TCGCGATGGA TCTGCCGTTC
GACAAGCTGG ATGTCGTGAC CTTCAGCTGG CAGAAGGTGC TGGGGGGCGA GGGCGCGCAT
GGCGTGCTGA TCCTGAGCCC GCGCGCCGTC GAGCGGCTGG AAACCCATAC CCCCGCCTGG
CCGCTGCCCA AGATCTTTCG CATGACCAAG GGCGGCAAGC TGATCGAGGG CATCTTCAAG
GGCGAGACCA TCAACACGCC CTCGATGCTG TGCGTCGAGG ATTACCTGGT GGCGCTGAAA
TGGGCGCAAT CGCTGGGCGG CCGCCAGGCG TTGGTGGCGC GGGCCGCGGC GAATGCGAAA
GCGGTGCGCG ACTTCATCGC CGGCCGCGAC TGGATCGCCG ATCTGGCCGA GGATCCGGCC
ACCGCCTCGA CCACGAGCGT ATGCCTGAAA TTCACCGATC CGCGCATCAA GGACGGTGCC
GCATTCGCCA AAGCCGTCGC CAAGCGGCTG GAGAAGGAAG GCGTGGCGCT GGACGCCGGC
GCCTATCGCG ATGCGCCCCC CGGCCTGCGG ATCTGGTGCG GCTCGACCGT CGAGACCGCG
GATGTCGCGG CGCTGATGCC CTGGATCGAG TATGCCTTCG AGGCCGAGAT CGAGGCGCAG
GCGGAAGTGG CCTGA
|
|---|
| Protein sequence | MGKTAPAARP ANPRFSSGPC AKIPNFSLDM LADAPLGRSH RAAIGKAKLA EAIDLTREVL
GVPADYRIGI VPASDTGAVE MALWSLLGAR KVEMLAWESF GEGWVTDVVK QLKLDAVVRK
ADYGKIVDFA QVDFDNDVVF TWNGTTSGVR VPNGDAIPAN RAGLTICDAT SAAFAMDLPF
DKLDVVTFSW QKVLGGEGAH GVLILSPRAV ERLETHTPAW PLPKIFRMTK GGKLIEGIFK
GETINTPSML CVEDYLVALK WAQSLGGRQA LVARAAANAK AVRDFIAGRD WIADLAEDPA
TASTTSVCLK FTDPRIKDGA AFAKAVAKRL EKEGVALDAG AYRDAPPGLR IWCGSTVETA
DVAALMPWIE YAFEAEIEAQ AEVA
|
|---|
| |