Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0796 |
Symbol | |
ID | 4580620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 770075 |
End bp | 770848 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639768115 |
Product | ABC transporter related |
Protein accession | YP_914604 |
Protein GI | 119383548 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.241057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC AAACCACCGC GATCCCCGCC GCAGGCCATG AGGCTGCCAT CGAGATCGTC AATCTCAACA AATGGTACGG AACCTTCCAT GTGCTGCGCG ACATCGACCT GGTCGTCAGC CGCGGCGAGC GCATCGTGAT CGCCGGCCCT TCGGGGTCGG GGAAATCGAC GCTGATCCGC TGCATCAACC GGCTCGAGGA ACATCAGGCC GGCAAGATCA TCGTGGACGG GACCGAACTG ACCCATGACC TCAAGAACAT CGACAAGGTG CGCTCCGAGG TCGGAATGGT GTTCCAGCAT TTCAATCTGT TCCCGCATCT GACGATCCTG GAAAACTGCA CGCTGGCGCC GATCTGGGTG CGCAAGATCC CCAAGCGCGA GGCCGAGGAA ACGGCCATGC ATTTCCTCAC CAAGGTCAAG ATCCCCGAGC AGGCGCATAA ATATCCCGGC CAGCTGTCGG GCGGCCAGCA GCAGCGGGTG GCCATCGCGC GCTCGCTGTG CATGCGGCCG CGGATCATGC TGTTCGACGA GCCGACCTCG GCCTTGGACC CCGAGATGAT CAAGGAGGTC TTGGACACCA TGATCGAGCT GGCCGAGGAC GGCATGACCA TGCTGTGCGT CACGCATGAG ATGGGTTTTG CCCAGGCCGT GGCGCATCGG GTGATCTTCA TGGACCAGGG CCAGATCGTC GAGCAGAACA CGCCGAAGGA GTTCTTCAAC AACCCCCGGT CCGAGCGCAC CAAGCTGTTC CTCAGCCAGA TCCTGGGGCA CTGA
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Protein sequence | MTTQTTAIPA AGHEAAIEIV NLNKWYGTFH VLRDIDLVVS RGERIVIAGP SGSGKSTLIR CINRLEEHQA GKIIVDGTEL THDLKNIDKV RSEVGMVFQH FNLFPHLTIL ENCTLAPIWV RKIPKREAEE TAMHFLTKVK IPEQAHKYPG QLSGGQQQRV AIARSLCMRP RIMLFDEPTS ALDPEMIKEV LDTMIELAED GMTMLCVTHE MGFAQAVAHR VIFMDQGQIV EQNTPKEFFN NPRSERTKLF LSQILGH
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