Gene Pden_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0796 
Symbol 
ID4580620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp770075 
End bp770848 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID639768115 
ProductABC transporter related 
Protein accessionYP_914604 
Protein GI119383548 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.241057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC AAACCACCGC GATCCCCGCC GCAGGCCATG AGGCTGCCAT CGAGATCGTC 
AATCTCAACA AATGGTACGG AACCTTCCAT GTGCTGCGCG ACATCGACCT GGTCGTCAGC
CGCGGCGAGC GCATCGTGAT CGCCGGCCCT TCGGGGTCGG GGAAATCGAC GCTGATCCGC
TGCATCAACC GGCTCGAGGA ACATCAGGCC GGCAAGATCA TCGTGGACGG GACCGAACTG
ACCCATGACC TCAAGAACAT CGACAAGGTG CGCTCCGAGG TCGGAATGGT GTTCCAGCAT
TTCAATCTGT TCCCGCATCT GACGATCCTG GAAAACTGCA CGCTGGCGCC GATCTGGGTG
CGCAAGATCC CCAAGCGCGA GGCCGAGGAA ACGGCCATGC ATTTCCTCAC CAAGGTCAAG
ATCCCCGAGC AGGCGCATAA ATATCCCGGC CAGCTGTCGG GCGGCCAGCA GCAGCGGGTG
GCCATCGCGC GCTCGCTGTG CATGCGGCCG CGGATCATGC TGTTCGACGA GCCGACCTCG
GCCTTGGACC CCGAGATGAT CAAGGAGGTC TTGGACACCA TGATCGAGCT GGCCGAGGAC
GGCATGACCA TGCTGTGCGT CACGCATGAG ATGGGTTTTG CCCAGGCCGT GGCGCATCGG
GTGATCTTCA TGGACCAGGG CCAGATCGTC GAGCAGAACA CGCCGAAGGA GTTCTTCAAC
AACCCCCGGT CCGAGCGCAC CAAGCTGTTC CTCAGCCAGA TCCTGGGGCA CTGA
 
Protein sequence
MTTQTTAIPA AGHEAAIEIV NLNKWYGTFH VLRDIDLVVS RGERIVIAGP SGSGKSTLIR 
CINRLEEHQA GKIIVDGTEL THDLKNIDKV RSEVGMVFQH FNLFPHLTIL ENCTLAPIWV
RKIPKREAEE TAMHFLTKVK IPEQAHKYPG QLSGGQQQRV AIARSLCMRP RIMLFDEPTS
ALDPEMIKEV LDTMIELAED GMTMLCVTHE MGFAQAVAHR VIFMDQGQIV EQNTPKEFFN
NPRSERTKLF LSQILGH