| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0794 |
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| Symbol | |
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| ID | 4580618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 767355 |
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| End bp | 768608 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639768113 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_914602 |
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| Protein GI | 119383546 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.138757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACCT ATACGGGGGC GGACAATCCG CCGTTCCGGT TGTCGATGCT GATCTATGAT
CGGCGCTACC GCTCGCTGAC CCTGCAAGCC ATCGTCTTCA TCCTGGTGAT GCTGGCGGCG
AGTTGGCTGA TCGACAACAC GCTGCGCAAC CTGTCCGCCA TGGGCAAGAC GCTCAGCTTC
GATTTCCTTT TCCGCCGCGC GGGATACGAC ATCCCGCAGC AGCTTATCCC ATACAATTCC
GACGACACCC ATCTGCGCGC TACCGTGATC GGGCTGCTGA ACACGCTGCT GGTCTCGATC
CTGGGCTGTA TCGCCGCGAC GATCCTGGGC GTGATCGTGG GCGTGCTGCG GCTGTCCTCG
AACTGGCTGA TCGCGCGGCT GATGACGGTC TATGTCGAGG TCTTCCGCAA CATCCCCCTG
CTGTTGTGGA TCCTGGTCTG CCTTGCGATC TTTACCGAGG TCATGCCGCC GCCCAACGCC
TATCGCGGCG AGAATCCGGC GGCGAACATG ATCCTGTTCG ACATGATCGC ACCCACGAAC
CGCTATACCG CCATCCCCTC GATCGGCATG ACCAACCCGC CCGGCACCAT CTCGCTGGGG
CGCGAGGGGA TCAGCTGGGC GTTCATCGCC TTTGCCGTGG TCATCGCCGC CGCCTGGACC
GGCTGGCGCG TGCTGCGCAA CTGGGCGCAG CGGGTGCAGG ACCGGACCGG CAAGCGGCCG
CGGACCTGGT GGATCAGCCT GGCGATGTTC GTCGTCCCGG TGCTGTTCCT GACCTGGTAT
TTCGGCCTGC ATCTGGTTCC GCCGGTGCTG CGCGGCTTCA ACTTCGCCGA CGGCATCAAC
CTCGACAACG CCTTCGTGGT GCTGTGGCTG GCACTGACGC TCTATACCGG CGCCTTCATC
GCCGAGATCG TGCGCGCCGG TATCCTGGCC GTCAGCCGCG GCCAGACCGA GGCAGCCTTT
GCGCTGGGAC TGCGCCCGCG CCGCACCATG TCGCTGGTCG TGCTGCCCCA GGCGTTGCGG
GTGATCGTGC CCCCGCTGAT CTCGCAATAC CTGAACCTGA CCAAGAACAG TTCGCTTGCC
ATCGCCGTGG GCTACATGGA CCTGCGCGGC ACGCTGGGCG GCACCACGCT GAACCAGACC
GGGCGCGAGA TGGAGGCGAT GGTGCTGATG ATGGGCATCT ATCTGGCGCT CAGCCTGATC
ATCTCGGCCG GGATGAACAT CTTCAACAGC CGCGTCAAGC TGAAGGAGCG GTGA
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| Protein sequence | MVTYTGADNP PFRLSMLIYD RRYRSLTLQA IVFILVMLAA SWLIDNTLRN LSAMGKTLSF
DFLFRRAGYD IPQQLIPYNS DDTHLRATVI GLLNTLLVSI LGCIAATILG VIVGVLRLSS
NWLIARLMTV YVEVFRNIPL LLWILVCLAI FTEVMPPPNA YRGENPAANM ILFDMIAPTN
RYTAIPSIGM TNPPGTISLG REGISWAFIA FAVVIAAAWT GWRVLRNWAQ RVQDRTGKRP
RTWWISLAMF VVPVLFLTWY FGLHLVPPVL RGFNFADGIN LDNAFVVLWL ALTLYTGAFI
AEIVRAGILA VSRGQTEAAF ALGLRPRRTM SLVVLPQALR VIVPPLISQY LNLTKNSSLA
IAVGYMDLRG TLGGTTLNQT GREMEAMVLM MGIYLALSLI ISAGMNIFNS RVKLKER
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